| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3965 |
|---|
| Symbol | |
|---|
| ID | 4694800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4350940 |
|---|
| End bp | 4351869 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639851714 |
|---|
| Product | alpha/beta hydrolase domain-containing protein |
|---|
| Protein accession | YP_998690 |
|---|
| Protein GI | 121610883 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.143493 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAGC CTGAAATCGC AGCCTTCGTC GCAGCGGTCG GCGCCTGGTA CCCGGCCAAT
GCGCTAGCGC GTTCGCCGGC CGAGCAGCGC CGCGTCTATG AGCGTTTTGC TGCGGCGTGG
ACGCCTGCCT CGCTGCCCGA AGGGCTGGTG CAGGAAGACG CCGCCTGCCA TGCGCCGGAC
GGGCGCGCGA TTTTGCTGCG CTGCCATCGG CCTGCGCATC GCACGCCGAG CGGTACCGTG
CTGTTCTTTC ATGGCGGCGG CTTCGTCGTC GGTTCGCTGG ACAGCCACGC GCTGATCACG
GCGCGTCTGG CGGCGGATTT CGGGCTGGCG GTGATCGCCA CGGATTACCG GCTCGCGCCT
GAGCATCCGG CGCCGGCGGC GCTCGAAGAT GCGTTGCTCG TCACACGGGC AGCGCTGGAT
GGGCGCTTGC CGTTCGGGCC GCTCGCGCGC CCGCTGACGC TCGCCGGCGA CAGTGCCGGC
GGCATGTTGG CGGCGGCCGT CGCGACGGCC TTGCGTGATG CGGCCTGCGG CGGCATCGAT
GGCATTGCGC TGGTGTATCC GATGCTGGGT GTGGCGCCGC AGCCTCCGGC GTGCGTGACC
GAGGCGCATG CGCCGATGCT GACGCTGGCC GACATCGACC GCTATCGCGC GCTGTACTGG
GGCGATCGAC CACCGCCGCC GGCAACGGTG CCGCTGGATG CGGCGCGCTT CGATGGCTTG
CCGCCGGTGT TGGCGCTCGG CGCCGAGCAT GATCCGCTGC GCGACGATGC CCGGGTCTAT
GTCGAGCGGA TTCGCGCGGC CGGCGGCGCT GCGCGGTTCT GGTTTGGCCA AGGGCTGGTG
CATGGCTGTT GGCGCGCGCA AGGCAGCAGC CCGCAAGCGG CACGGATGCA TGAAGTGATC
GGAAACTTCC TGCGCGCGCC ATGCGCGTAG
|
|---|
| Protein sequence | MLEPEIAAFV AAVGAWYPAN ALARSPAEQR RVYERFAAAW TPASLPEGLV QEDAACHAPD
GRAILLRCHR PAHRTPSGTV LFFHGGGFVV GSLDSHALIT ARLAADFGLA VIATDYRLAP
EHPAPAALED ALLVTRAALD GRLPFGPLAR PLTLAGDSAG GMLAAAVATA LRDAACGGID
GIALVYPMLG VAPQPPACVT EAHAPMLTLA DIDRYRALYW GDRPPPPATV PLDAARFDGL
PPVLALGAEH DPLRDDARVY VERIRAAGGA ARFWFGQGLV HGCWRAQGSS PQAARMHEVI
GNFLRAPCA
|
|---|
| |