| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3956 |
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| Symbol | |
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| ID | 4691277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 4341493 |
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| End bp | 4342770 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639851705 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_998681 |
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| Protein GI | 121610874 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.148208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGG CGATGATTGC CACCATGGTG CTGTGCTTTG CGCTCACCAT CTCGGTGGCC
GTGTCCATCG GCCTGGCCTC GATCCTCGGC ATTCAGTTGT CGAACGTGAA CATGCTGATC
GCCACCAAGG AGATGTTCAG CGCGATCAAC AAGTTTCCGC TGGCCGCCAT CCCCTTCTTC
ATCCTGGCCG GCAACCTGAT GGAAACCGGC GGCATCTCGC GCCGGCTGGT GGAGTTTGCC
AAGAGCATCG TCGGCGGCGT GCAAGGCGGC CTGCCGATGA CCTGCGTGCT CACCTGCATG
ATCTTTGCTG CGGTCTCGGG CTCGTCGGTG GCCACCACCT TTGCCATTGG CGCGATCCTG
ATTCCGGCGC TCATCCGGCA TGGCTATCCC GGCAGCTACG CAGCGGCGCT GCAGGCCACC
AGCGCCGAAC TGGGCGTGAT CATTCCGCCG TCGATTCCGA TGATCCTGTA CGGCGTCAGC
GCCGAGGTCT CGATCGGCGA ACTGTTCAGC GCCGGTTTTG GTCCCGGCCT GTTGATCAGC
GCTGCGCTGA TGCTGTTCGT CTGGGCCTAC TGCAAATACA AGGGCTGGGG CAAGAACGAC
GGCGACGGCC GCATGCCCGT GGGCCGGGCC ACGCTGCAAG CCGGCTGGGC GCTGCTGATG
CCGGTGATCA TCCTGGGCGG CATCTACGGC GGCGTCTTCA CCCCCACCGA GGCTTCGGCC
GTGGCCGTGT TCTATGCGCT GATGGTGGGC GTGGTGATCT ACCGCGAGAT CCAAGTCGCG
GACCTGTTTG CCATCCTGCG CAAATCCGCG CTGTCGGCGG CGGTGATCAT GTTCATCATC
GCCAATGCCG GCTTGTTTGC CTTTCTGATC ACGCGCGCCG GCGTGCCCGA TGCGATCGGG
CACTGGCTGC AGGCCGTGCT GCAATCGCCG GCGCTGTTCC TGCTGGGCGT GAATGCAGCG
CTGTTCGTGA TCGGCATGTT CATCGAGACC AGCGCCGCCA TCATCGTGCT GGCGCCGATC
CTGGCGCCGG TGGCAATGCA CTTTGGCATC GATCCGGTGC ATTTCGGCCT GGTCATGGTG
GTCAATCTGG CGCTGGGCAT GATCACACCG CCGTTTGGCG TCAACCTGTT TGCTGCCTGC
ACGGTGGCAA GACTGCCGCT CGAGCACATC GTCCGGCATC TGCTGCCCTT CGTCGGCGTG
ATTTTGCTGT GCCTGATGCT CATCACCTAT GTGCCATCGA TCTCGCTGTC AGTGCGTGAT
CTGGTCTATG CAAAGTAG
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| Protein sequence | MSLAMIATMV LCFALTISVA VSIGLASILG IQLSNVNMLI ATKEMFSAIN KFPLAAIPFF
ILAGNLMETG GISRRLVEFA KSIVGGVQGG LPMTCVLTCM IFAAVSGSSV ATTFAIGAIL
IPALIRHGYP GSYAAALQAT SAELGVIIPP SIPMILYGVS AEVSIGELFS AGFGPGLLIS
AALMLFVWAY CKYKGWGKND GDGRMPVGRA TLQAGWALLM PVIILGGIYG GVFTPTEASA
VAVFYALMVG VVIYREIQVA DLFAILRKSA LSAAVIMFII ANAGLFAFLI TRAGVPDAIG
HWLQAVLQSP ALFLLGVNAA LFVIGMFIET SAAIIVLAPI LAPVAMHFGI DPVHFGLVMV
VNLALGMITP PFGVNLFAAC TVARLPLEHI VRHLLPFVGV ILLCLMLITY VPSISLSVRD
LVYAK
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