| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3953 |
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| Symbol | |
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| ID | 4692924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 4337623 |
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| End bp | 4339500 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639851702 |
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| Product | ABC transporter related |
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| Protein accession | YP_998678 |
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| Protein GI | 121610871 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.594442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.489079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCCCC CGGCCGAGAC AGACCTGCGC TGCGCTGCGC GCAGCCGGTT CATGCACCGG
CTCACGCGCG CGCGGCTCAC GCTGGCGGCC TTGGCCCTGC TGGTGCTGTG CTGGGGCTGG
CTGCCGGATT TCAGCGTGGT CCTGCTCTGC CACATCGCGC TGTATGCGCT GGTGGCGCTC
GGGCTGGTGC TGCTCACCGG CATCGGCGGC ATGACCTCCT TTGGCCAGGC GGCTTTCGTG
GGCATCGGGG CCTATGCCAC GGCCTGGGTC TGCACGGCGC CGGCGCCGGT GCAGTGGCTC
GCCGGCGCCG TGGGCATGGC CGGCCTGCCC TGGGTCGGGC TGGCGCTGGG GCTGGCGCTC
ACCACGGTGC TGGCCTGGGG CCTGGGCGCG GTCACGCTCA GGCTGTCGGG CCACTACCTG
CCGCTGTGCA CCATCGCCTG GGGGCTGAGC CTGTACTACC TGTTCGGCAA CATGTCCTTC
CTGGGCGGGC AGACCGGCAT CACCGGTGTG CCGCCGCTGG TGCTGGGCGG CTTGTCGCTG
GCCGCGCCGC GCGCCATCGG CCTGCTGATC TGGGCGCTGC TGTTGCTTGC CCTGTGGCTG
CTGCACAACC TGCTGGACTC GCGCGCCGGC CGCGCCATCC GCGCGCTCAA GGGCGCCCGG
GTGATGGCCG AGTCGATGGG GGTGGACACG GCGCGCTACC GCATCCGGCT GTTCGTGCTG
GCGGCATTGC TGGCAGCGCT TTCGGGCTGG CTGTATGCGC ACCTGCAGCG CTTCGTCAGC
CCGACGCCAT TCAATCTGCA TATCGGCATC GAATACCTGT TCATGGCCGT GGTCGGCGGC
GCGGGCCACC TGGGGGGCGC GGTGCTGGGC GCCACGCTGA TCACCCTGCT CAAGGAAAAG
TTGCAGGATT GGCTGCCGTC CCTGCTGGGC AGCAGCGGCA ACTTCGAGCT CATCGTGTTC
GGGCTGCTGA TGGTGCTGGT GCTGCAACGC TTTGCCGACG GACTATGGCC GATGCTCGAA
CGCCTGGGCC AGCGTTGCCT GCGCCGCGCT GCGCCACGCG CCATGCACCC GGCCGCGAAT
CCGGCAGCGC TGACGGCGCT GACGCAGCGC ACGCTGCCGC CCCCCGGCAC GGTGCTGCTG
CAGGCGCGCA ACATCACCAA GCGCTTTGGC GGCCTGCTGG CCAACGACGC CGTGTCGATG
GATGTCCGGG CCGGCCAGGT GCATGCGCTG ATCGGCCCGA ATGGCGCGGG CAAGAGCAGC
TTTTTCAACA TCATCTCGGG CCTGGACGAG GCCAGCGCGG GCGATTTGCA GTTGATGGGG
CAGGCCATGC GGCGCCAGCC GGCGCGCGCG TTTGCCCGCC TGGGCCTGGC GCGCAGTTTC
CAGCATGTGC GCCTGCTGGG CCAGCGCAGC GTGCTCGAGA ACGTGGCGCT GGGTGCGCAC
CTGCGCGCCC GGGGTGGCTG GCTGATGGCC ATGCTGCGGC TCGACCGGGC GCAGGAAGCG
GCCCTGCTGG CCGAGGCGCA GCGCCAGATC GAGCGCTGCG GCTTGGCGGC CCATGCCGAT
GCGCCGGTCG CATCGCTGGC GCTGGGCCAG CAGCGCATCG TGGAAATCGC CCGCGCCCTG
GCCGGCCAGC CGGCGCTGCT GCTGCTCGAC GAGCCTGCCG CCGGCCTGCG CCATCTGGAA
AAGCAGGCCC TGGCGCAGTT GCTGCGCCAA TTGCGCGCCG AGGGCCTGGG GCTGGTGGTG
GTCGAGCATG ACATGGAGTT CGTGATGCAG TTGGCCGACC ACATCACGGT GCTGGACTTC
GGCTGCGTGA TCGCCGAAGG CAACGCGCTG CAGGTGCAGC GCAACCCACA GGTGCTTGCT
GCCTACCTGG GCGGCTGA
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| Protein sequence | MTPPAETDLR CAARSRFMHR LTRARLTLAA LALLVLCWGW LPDFSVVLLC HIALYALVAL
GLVLLTGIGG MTSFGQAAFV GIGAYATAWV CTAPAPVQWL AGAVGMAGLP WVGLALGLAL
TTVLAWGLGA VTLRLSGHYL PLCTIAWGLS LYYLFGNMSF LGGQTGITGV PPLVLGGLSL
AAPRAIGLLI WALLLLALWL LHNLLDSRAG RAIRALKGAR VMAESMGVDT ARYRIRLFVL
AALLAALSGW LYAHLQRFVS PTPFNLHIGI EYLFMAVVGG AGHLGGAVLG ATLITLLKEK
LQDWLPSLLG SSGNFELIVF GLLMVLVLQR FADGLWPMLE RLGQRCLRRA APRAMHPAAN
PAALTALTQR TLPPPGTVLL QARNITKRFG GLLANDAVSM DVRAGQVHAL IGPNGAGKSS
FFNIISGLDE ASAGDLQLMG QAMRRQPARA FARLGLARSF QHVRLLGQRS VLENVALGAH
LRARGGWLMA MLRLDRAQEA ALLAEAQRQI ERCGLAAHAD APVASLALGQ QRIVEIARAL
AGQPALLLLD EPAAGLRHLE KQALAQLLRQ LRAEGLGLVV VEHDMEFVMQ LADHITVLDF
GCVIAEGNAL QVQRNPQVLA AYLGG
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