Gene Veis_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3948 
Symbol 
ID4694914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4332996 
End bp4333505 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content74% 
IMG OID639851697 
Productphenylacetate-CoA oxygenase, PaaJ subunit 
Protein accessionYP_998673 
Protein GI121610866 
COG category[R] General function prediction only 
COG ID[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID[TIGR02159] phenylacetate-CoA oxygenase, PaaJ subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.641663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.597534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGATGG ACGCGCCCGC GCGGCTGCAG CGCGCCTGGG AGGTGCTCGA CAGCGTGCCC 
GACCCCGAAC TGCCCGCCGT CTCCCTGTGC GACCTGGGCA TCGTGCGCGA CGTGCGGCTG
GCCGGCGCTG CGTTGCAACT GCTGCTCACC CCCACCTACA GCGGCTGCCC CGCCACCGAG
GTCATCGCGC ACGATGTGCT GGCCGCGATC GACGCGGCGG GTCTGGGCCC GGCCCAGGTC
CAGTGGCAGC GCGCCCCGGC CTGGAGCACC GACTGGATCA CCGAGCGGGG CCTGGCCCGG
CTGCACGCCC ATGGCATCGC GCCCCCGGGC GCGGTGGCGG CGGGCAACGC GGTGTCGCTG
CACTTCATGC CGCGTGCCGC GGCACTAGCC TGTCCGCGCT GCGGCAGCCG GCAAACGCAG
TGCCTGTCCG CCTTCGGCGC CACGGCCTGC AAGGCGCTGT ACCGGTGCCT GGACTGCCGC
GAGCCCTTCG AGCATTTCAA GCCCTTGTAA
 
Protein sequence
MVMDAPARLQ RAWEVLDSVP DPELPAVSLC DLGIVRDVRL AGAALQLLLT PTYSGCPATE 
VIAHDVLAAI DAAGLGPAQV QWQRAPAWST DWITERGLAR LHAHGIAPPG AVAAGNAVSL
HFMPRAAALA CPRCGSRQTQ CLSAFGATAC KALYRCLDCR EPFEHFKPL