Gene Veis_3942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3942 
Symbol 
ID4693896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4328079 
End bp4328912 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content71% 
IMG OID639851691 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_998667 
Protein GI121610860 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID[TIGR02280] phenylacetate degradation probable enoyl-CoA hydratase paaB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.908952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.56539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAC CCCTTGTCTT GGTGACGCAA TCGGGTGCCG TGCAAACGCT GGCGCTGAAC 
CGGCCGGCCG CGCTGAACAG CTTGACCGCC GCGTTGCACG CGCAGTTGCT GGCCGCGCTG
GAGGCCACCG CTGCCGCGTG CGACGTGCGC TGCGTGGTCA TCACGGGCAT GGGGCGGGCG
TTTTGCGCCG GCCAGGACCT GAATGACATC GCCGCCGCGC CTGCGTCCGG TTCGGGCGAT
CCGGCGCCCG CGCCCGGTTC GGCGGGCGCT CAGGCCCAGG ACTTGGGCCG CGTGATCGAG
ACCCTGTACC GGCCGCTGTG TCTGCGCATC CGCAGCATGC CCGTTCCGGT GCTGGCAGCG
GTCAACGGTG TGGCCGCCGG TGCCGGTGCC TGCCTGGCTC TGGGCTGCGA TCTGGTGCTG
GCGGCGCGTT CGGCCAGTTT CATCATGGCT TTCAGCAAAA TCGGGCTGCT GCCCGATACC
GGCGGAACCT GGCTGCTGCC GCGCCTGGTG GGGCGCGCGC AGGCTCTGGG GCTGGCCTTG
CTGGGCGACA AACTGCCTGC GCCCGAGGCC GAGCGTCGCG GCCTGATCTG GCGCTGCGTG
GACGACGCCA GTTTGCCGGA CGAGGCGCTG GCCCTGGCGC AGCGCCTGGC CGCCATGCCC
GTCAAGGCGC TGGTGGCCAC GCGCCAGGCC ATGGATGCTG CGGCGCAACT GGACTACGGC
CAGGCGCTGG CGCAGGAAGC GGCCATGCAG CAAACGCTGG GCGCCGGTGC CGATTACCGC
GAAGGCGTCG CGGCCTTCGC CGGCAAGCGC GCCCCTCGTT TCACCGAGCG TTGA
 
Protein sequence
MSEPLVLVTQ SGAVQTLALN RPAALNSLTA ALHAQLLAAL EATAAACDVR CVVITGMGRA 
FCAGQDLNDI AAAPASGSGD PAPAPGSAGA QAQDLGRVIE TLYRPLCLRI RSMPVPVLAA
VNGVAAGAGA CLALGCDLVL AARSASFIMA FSKIGLLPDT GGTWLLPRLV GRAQALGLAL
LGDKLPAPEA ERRGLIWRCV DDASLPDEAL ALAQRLAAMP VKALVATRQA MDAAAQLDYG
QALAQEAAMQ QTLGAGADYR EGVAAFAGKR APRFTER