| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3941 |
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| Symbol | trmD |
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| ID | 4694250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 4327166 |
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| End bp | 4327930 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639851690 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_998666 |
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| Protein GI | 121610859 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.55595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTTTG ACATCATCAC CCTGCTTCCC GAACTGTTCG CACCGTTGCT GGCCAGTGGC
GTGACGCGGC GCGCCTACGC CAGCGGGCAG GTCGATGTGC GCCTGTGGAA CCCGCGCGCG
TATGCCGAAG GCCATTACCG CCGGGTCGAT GACCGCCCGT TTGGCGGCGG GCCGGGCATG
GTGCTGCTGG CCGAGCCGCT GGCGCGCTGC CTGGCGGCGA TCCGCGCCGG GCGCGGCGAA
CCCCGCGCCG GCCAAGCGCC GCTGGTGCTG TTTTCGCCCA TTGGCGAGCC GCTCCGGCAC
CGCCTGGTGC AGCGCTGGTC GGCCAGCGCC GGCGCCATCT TGCTGTGCGG GCGGTATGAA
GGCGTAGACC AGCGCTTCAT CGACGCGCAT GTCGACTTGC AGATCAGCCT GGGCGACTTT
GTGTTGTCGG GCGGTGAAAT TGCGGCCATG GCCTTGCTCG ATGCCGTGGC GCGCCTGCAG
CCCGGCGTGC TCAATGACCA GGACAGCCAC CAACTCGACA GCTTCCATCC GGCCCTCGAC
GGCCTGCTCG ACTGCCCGCA CTACACGCGC CCGCAGACCT GGGCCGGGCA GTCGGTGCCG
GCCGCACTGC TGTCGGGCAA CCATGCGCAG ATCGAGCGCT GGCGGCGCGA GCAGCGCCTG
GCCGTCACCG CCCGCCACCG GCCCGAACTG ATCGATGCCG CGCGCCAAGC CGCCCGCCTG
AGCGCTGCCG ACGAAGCCTT CCTGGCCCAG CTTGGCGGGG GTTGA
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| Protein sequence | MRFDIITLLP ELFAPLLASG VTRRAYASGQ VDVRLWNPRA YAEGHYRRVD DRPFGGGPGM
VLLAEPLARC LAAIRAGRGE PRAGQAPLVL FSPIGEPLRH RLVQRWSASA GAILLCGRYE
GVDQRFIDAH VDLQISLGDF VLSGGEIAAM ALLDAVARLQ PGVLNDQDSH QLDSFHPALD
GLLDCPHYTR PQTWAGQSVP AALLSGNHAQ IERWRREQRL AVTARHRPEL IDAARQAARL
SAADEAFLAQ LGGG
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