Gene Veis_3933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3933 
Symbol 
ID4693880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4320970 
End bp4321731 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content63% 
IMG OID639851682 
Productcytochrome c1 
Protein accessionYP_998658 
Protein GI121610851 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.563228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGAC CCATCCTCAC GCTGATCGCC GCCCTGGGCC TGCTTGCCGG CGCGGCCCAT 
GCCGCAGGTG ATGAAGCCAT CGCCTGGGAC AAGGCGCCAG GCAAGACCAA CGACTTGGCG
TCGCTGCAAA ACGGCGCCAA ACTGTTCGTC AACTACTGCC TGAGCTGTCA CTCTGCCGCC
TACATGCGCT TCAACCGGCT GCGCGACATC GGCCTGACCG AGCAGCAGAT CAAGGACAAC
CTGCTGTTCA CGACCGACAA GATCGGTGAG ACCATGAAGG CCGCGATCGA CCCCAAGCAG
GCCAAGGAAT GGTTCGGCGC CAACCCGCCC GATCTGACCG TGATCGCACG CTCGCGCGCA
GGCCATGGCG GCACGGGTGC CGACTACCTG TACACCTTCC TGCGCAGCTT CTACCGTGAT
GAAACCAAGG CCACTGGCTG GAACAACCTG GCTTTCCCGA GCGTGGGCAT GCCCCATGTG
CTGTGGCAAC TCCAGGGCGA CCGGCGACCG GTGTTCGAGG CGCAGCAAAG CCACGGCCAC
AGCACCGAGG TATTCAAGGG CTGGCAGCAA ATCACGCCCG GCAGCATGAC GCCGCTGCAG
TTCGATCAAA ACGTCGGGGA TCTGGTGAAC TACCTGCAAT GGATGGGCGA GCCCGCGCAG
AACACGCGCA AGCGCGTGGG CGTCTGGGTG ATCCTTTTTC TGCTCCTGTG CACGTTCATC
ACCTGGCGGC TGCACGCGGC CTACTGGAAG GACGTGAAGT AA
 
Protein sequence
MKRPILTLIA ALGLLAGAAH AAGDEAIAWD KAPGKTNDLA SLQNGAKLFV NYCLSCHSAA 
YMRFNRLRDI GLTEQQIKDN LLFTTDKIGE TMKAAIDPKQ AKEWFGANPP DLTVIARSRA
GHGGTGADYL YTFLRSFYRD ETKATGWNNL AFPSVGMPHV LWQLQGDRRP VFEAQQSHGH
STEVFKGWQQ ITPGSMTPLQ FDQNVGDLVN YLQWMGEPAQ NTRKRVGVWV ILFLLLCTFI
TWRLHAAYWK DVK