| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3929 |
|---|
| Symbol | |
|---|
| ID | 4690549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4317868 |
|---|
| End bp | 4318827 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639851677 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_998654 |
|---|
| Protein GI | 121610847 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.356265 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGTTGA TTATCACGGA CGCCAGGCTG GCGCGTAGCC GGGCCATTCA TTTGTCCGGC
ACGCGCTTGC TGTTGGCGGG TTTGGCGCTG TCGCTGTGCC TGGTGCTGGT GGCCGCGACC
TTGTACCACT GGGTGTTTTT GCAAGGCGCG CGCGCGGGCT GGCCGATCAT CGGCTCGCTG
GTGCGTCTGG TGGTCCAGGA CGAGTTTGCC GAGCGCGATC GCTTCATGCG GGCCAATCTG
GATGCCATGG CGCGGCGCGT GGGGGAAATG CAGGCCCGGA TGGTGCAACT GGAATCGCTG
GGCGAGCGCG TTCTGGGTCT GGCCGGCATG GCACCGGCAG ATATCCCGAA AGCCGCCGCC
GGGCGCGGCG GGGCGCTGGT GGGCGCGCAC GATCTGTCGA TCGAGCAGTT GCAGGCCACG
CTGGACGACC TGGAGCACCT GACGAACCAG CGTGTGGATC TGATGACGGT GCTCGAATCG
CGTTTGTTCG ACCAGCATAT CCGCAAGAAG ATGATCCCCA CCCACGAGCC AGTTGCGGGG
CGGCCGGCGG GTTCGGGCTT TGGCTGGCGC CTGGACCCGA TCAGCGGCCA GTCGGCGCTG
CACTCCGGCC TGGACTTCCA GGCGGACACC GGCACGCCAA TCCTGGCCGC CGCAGGCGGT
GTGGTGGTGG TGCAGGAATT TCATCCCGCC TACGGCAACA TGGTCGAGAT CGACCATGGC
AACCAGGTGC TGACCCGCTA TGCGCACGCA TCACGCACAC TGGTCAAGCG CGGCGACATT
GTGCGCAGCG GGCAGAAGAT TGCGGAAGTG GGCACCACCG GACGCTCCAC CGGGCCCCAT
CTGCACTTTG AGGTGCTGGT GCAAGGGGTT TTCCAGGATC CGCAGAAATT CCTGAGCGCT
GGCGGCACGG ACACCGCTGC ACCACTGGAG CACGCTTGGT CGGCGGCACG GGGCAGGTAA
|
|---|
| Protein sequence | MQLIITDARL ARSRAIHLSG TRLLLAGLAL SLCLVLVAAT LYHWVFLQGA RAGWPIIGSL
VRLVVQDEFA ERDRFMRANL DAMARRVGEM QARMVQLESL GERVLGLAGM APADIPKAAA
GRGGALVGAH DLSIEQLQAT LDDLEHLTNQ RVDLMTVLES RLFDQHIRKK MIPTHEPVAG
RPAGSGFGWR LDPISGQSAL HSGLDFQADT GTPILAAAGG VVVVQEFHPA YGNMVEIDHG
NQVLTRYAHA SRTLVKRGDI VRSGQKIAEV GTTGRSTGPH LHFEVLVQGV FQDPQKFLSA
GGTDTAAPLE HAWSAARGR
|
|---|
| |