| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3920 |
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| Symbol | |
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| ID | 4694506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 4308265 |
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| End bp | 4309488 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639851668 |
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| Product | type II secretion system protein |
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| Protein accession | YP_998645 |
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| Protein GI | 121610838 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.128223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0658085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCA TCACGGCAGC AAAAAGAGAG ATCAAGGAAA AAGTCTTCGA ATGGGAAGGC
AAGGACCGCA ATGGAAAAAT CGTCCGCGGC GAGATCCGGG CGGTTGGTGA AAACCAGGTG
CAGGCGAGCC TGCGCCGTCA AGGGGTGCTC TCGACGAAAA TCAAGGAGCG CCGCATGCGC
TCCGGCAAGA AGGTCAAACC CAAGGATATT GCACTTTTTA CCCGGCAATT GGCGACCATG
ATGAAGGCCG GTGTTCCGCT GCTGCAGTCC TTCGACATCG TGGGGCGTGG CTCTACCAAC
CCCAGTGTCA CCAAATTGCT CAATGACATC CGCTCCGATA TCGAGACCGG CACTTCCCTG
AGCGGTGCCT TCAGACATTA TCCAAAATAC TTCAACGAGC TCTACTGCAA TCTGGTGGAG
GCCGGCGAAA CCGCCGGTAT TTTGGAATCC CTGCTGGATC GGCTTGCCAC TTACATGGAA
AAAACCGAGG CGATCAAGTC ACGGATCAAA TCGGCCTTGA TGTACCCCAG CGCGGTGCTG
TGCGTGGCCT TTGTGGTGGT GTCGCTGATC ATGGTTTTCG TGATCCCGGC CTTCAAAGAG
GTTTTCACCT CCTTCGGCGC CGATCTTCCG CCGCCCACCT TGCTCGTCAT GGCCATCAGT
GAGACTTTCG TCCACTGGTG GTGGTTGATT TTCGGGGGTG TCGGTGGTGG CATTTTCTTC
TTCATGCAGT CCTGGCGGCG CAATGAGAAA TTGCAGAAGT TCATGGATCG CCTGCTGTTG
CGCTTGCCGA TTTTCGGGGT ACTGTTCGAG AAAGCATGCG TTGCGCGCTG GACCCGAACG
CTGTCGACGA TGTTTGCCGC CGGGGTTCCG CTCGTGGAGG CGCTGGACTC GGTGGGGGGG
GCCGCAGGCA ACTCGGTCTA CGCGTCGGTA ACGGACAAGA TTCAGCAGGA AGTCTCCACC
GGCACCAGTC TCACGGTGGC CATGGGCAAC GCCAATATCT TTCCGACGAT GGTGCTGCAA
ATGTGTGCCA TTGGTGAAGA GACCGGTTCC ATCGATCACA TGCTGGGCAA GGCCGCCGAT
TTTTACGAGG CAGAAGTCGA TACCATGGTG GCGGGCATAT CCAGCCTGAT GGAGCCGATC
ATCATCGTTT TTCTTGGCTG CCTGATCGGC GGCATCGTCA TCTCGATGTA TCTGCCGATC
TTCAAATTGG GACAGGTCGT GTAA
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| Protein sequence | MATITAAKRE IKEKVFEWEG KDRNGKIVRG EIRAVGENQV QASLRRQGVL STKIKERRMR
SGKKVKPKDI ALFTRQLATM MKAGVPLLQS FDIVGRGSTN PSVTKLLNDI RSDIETGTSL
SGAFRHYPKY FNELYCNLVE AGETAGILES LLDRLATYME KTEAIKSRIK SALMYPSAVL
CVAFVVVSLI MVFVIPAFKE VFTSFGADLP PPTLLVMAIS ETFVHWWWLI FGGVGGGIFF
FMQSWRRNEK LQKFMDRLLL RLPIFGVLFE KACVARWTRT LSTMFAAGVP LVEALDSVGG
AAGNSVYASV TDKIQQEVST GTSLTVAMGN ANIFPTMVLQ MCAIGEETGS IDHMLGKAAD
FYEAEVDTMV AGISSLMEPI IIVFLGCLIG GIVISMYLPI FKLGQVV
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