| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3919 |
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| Symbol | |
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| ID | 4693992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 4306572 |
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| End bp | 4308239 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639851667 |
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| Product | type IV-A pilus assembly ATPase PilB |
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| Protein accession | YP_998644 |
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| Protein GI | 121610837 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.762326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0339341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAG GCAAGCTGAG TCAGAAATCG GCCGAGGACA TTTACAAGAA GTCCCAGGCC
AACCGCACCA GTTTCATTGC CGAATTGACC GGCTCCGGGG CTGTCTCCGC CGCTGACTTG
GCGCATACGG TGTCGACCGT CTTTGGCGCG CCCCTTCTCG ATCTCGATGC CATCGATCCG
TCGCGTTTGC CAAAGGATTT GCTGGATAAC AAGATATGCA AGACCTGCCG CGTCGTCGTA
CTGAGCAAAC GCAGTAATCG CCTGATCGTC GCAACGGCAG ACCCTACCGA CCAGGAAGCG
GCTGAAAAAA TCAAGTTTGC CACCCAGATG GGCGTGGACT GGGTCATCGC GGAATATGAC
AAACTCAGCC TTCTGGTCGA AGCGATCACC AAATCCGCCA ACGAAGCAAT GGATACGCTG
GTCAGTGGCG GTGACTTCGA GTTCGACGAT ATGGCGGTCG AAACTGCCAC CGAAGATGCG
GCTGTGGCAG CCACGGATGT CGAAGATGCT CCGATCGTCA AGTTTCTGCA CAAAATGCTG
CTGGACGCCT TCAACATGCG CGCGTCCGAC CTGCATTTCG AACCCTACGA GCACCAGTAC
CGCGTCCGCT TCCGCATCGA TGGCGAGTTG CGGGAAATAG CTTCGCCGCC GATTGCGATC
AAGGAAAAGC TGGCTTCCCG CATCAAGGTC ATTTCGCGCC TGGATATCTC GGAAAAACGC
ATTCCACAAG ATGGCCGCAT GAAGCTGAAA GTCGGCCAGA ACCGGGTGAT CGACTTCCGG
GTCAGCACCT TGCCCACCTT GTTTGGCGAG AAAGTCGTCA TCCGTATTCT GGATCCGAGC
AGCGCCAAAC TGGGTATCGA TGCGCTGGGC TATGAACCGG TGGAGAAAGA GCGGCTACTC
CAGGCCATCG GTCGCCCCTA CGGCATGATT TTGGTCACAG GCCCTACCGG TTCGGGCAAG
ACCGTGTCAC TGTATACCTG TCTGAATCTC CTGAACAAAC CGGACGTCAA TATCGCGACG
GCAGAAGACC CTTGCGAAAT CAACCTGCCG GGCGTGAATC AGGTAAACGT CAACGAAAAG
GCCGGCCTGA CATTTGCTGC GGCGCTGCGC TCCTTCCTGC GCCAGGATCC CGACATCATC
ATGGTCGGGG AAATACGGGA TCTGGAAACT GCCGACATCT CGATCAAGGC GGCACAAACC
GGGCACCTGG TGCTGTCCAC CCTGCACACG AATGACGCGC CGACGACCTT GACACGGATG
CGCAACATGG GTATTGCGCC ATTCAATATT GCGTCCAGCG TGATTCTGAT CACCGCGCAG
CGCCTGGCGC GCAGGCTGTG CCCGATCTGC AAAACCCCGA CGGACATACC CCAGGAGACC
CTGGTCGATG CGGGATACCA AGAGGAGGAG ATCGACGGCT CCTGGGTTAC TTATGGTCCG
GTCGGCTGCA ACGCTTGCAA CAATGGCTAC AAGGGCCGGG TCGGCATTTA TCAGGTGATG
CCGATCACAG AGGAAATCCA GCGCATCATC CTGCGCGATG GCAGCGCCCT GGAGATTGCC
GAGCAAGCCC GCATGGAGGG TGTGCGCTCA TTGCGCGACG CGGGCCTGTA CAAGGCCAAG
TTGGGCCTGA CTTCCCTCGA AGAAGTCCTG GCCGTCACCA ACGAATAA
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| Protein sequence | MSAGKLSQKS AEDIYKKSQA NRTSFIAELT GSGAVSAADL AHTVSTVFGA PLLDLDAIDP
SRLPKDLLDN KICKTCRVVV LSKRSNRLIV ATADPTDQEA AEKIKFATQM GVDWVIAEYD
KLSLLVEAIT KSANEAMDTL VSGGDFEFDD MAVETATEDA AVAATDVEDA PIVKFLHKML
LDAFNMRASD LHFEPYEHQY RVRFRIDGEL REIASPPIAI KEKLASRIKV ISRLDISEKR
IPQDGRMKLK VGQNRVIDFR VSTLPTLFGE KVVIRILDPS SAKLGIDALG YEPVEKERLL
QAIGRPYGMI LVTGPTGSGK TVSLYTCLNL LNKPDVNIAT AEDPCEINLP GVNQVNVNEK
AGLTFAAALR SFLRQDPDII MVGEIRDLET ADISIKAAQT GHLVLSTLHT NDAPTTLTRM
RNMGIAPFNI ASSVILITAQ RLARRLCPIC KTPTDIPQET LVDAGYQEEE IDGSWVTYGP
VGCNACNNGY KGRVGIYQVM PITEEIQRII LRDGSALEIA EQARMEGVRS LRDAGLYKAK
LGLTSLEEVL AVTNE
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