| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3903 |
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| Symbol | smpB |
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| ID | 4695259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 4292313 |
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| End bp | 4292786 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639851650 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_998628 |
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| Protein GI | 121610821 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0606215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAAAA AACCCGATCC TGCGTCCCGC ATTGCCGACA ACAAGAAAGC GGCCCACGAC
TATTTCCTGG AAGAACGCTA CGAAGCAGGC ATGGTGCTGC ATGGCTGGGA GGTCAAGGCG
TTGCGCGCGG GCAAGGCACA GCTGACCGAC GGCTATGTGC TGATTCGCGA CGGCGAGCTG
TTTTTGCTCG GCTGCCAGCT CCAAGCGCTC AAGACCGCGT CCACCCATGT CAGCCCCGAG
GCGGCGCGCA CGAAGAAATT GCTGCTCAAG AAGGACGACA TCCGGCGCCT GATCGGCAAG
GTCGAACAAA AGGGCTACAC CCTGGTGCCG CTGAACCTGC ACTGGAAAAA TGGCGTCGTG
AAATGCGAGA TCGCGCTGGC CAGGGGCAAG GCCCAGCACG ACAAGCGCAA CTCCATCAAG
GAGCGTGAAG GCAAGCGCGA GGTCGAGCGC GCGCTGAAAA GCCGCAGCCG TTGA
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| Protein sequence | MTKKPDPASR IADNKKAAHD YFLEERYEAG MVLHGWEVKA LRAGKAQLTD GYVLIRDGEL
FLLGCQLQAL KTASTHVSPE AARTKKLLLK KDDIRRLIGK VEQKGYTLVP LNLHWKNGVV
KCEIALARGK AQHDKRNSIK EREGKREVER ALKSRSR
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