Gene Veis_3874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3874 
Symbol 
ID4694502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4269345 
End bp4270877 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content68% 
IMG OID639851622 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_998600 
Protein GI121610793 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0918503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCA ACCTCTTGAT CTACAACGGC GGCCTGATAC TGCCAGGCAC CCAGTTGCAG 
GCACAGGCCG ACCGCGCCGC CGCCGGCTTT GAACAGCTTG GACTGCGGGC TGGCGACACC
GTCGCGGTGA TGCTGCGCAA CGATGTTCCC TATCTGGAGC TGATGCTGGC CCTCAACCAG
CTCGGCATTC ACCTGGTGGC CGTGAACTGG CACTTCCAGG CCGAAGAGGC GGCCTACGTA
TTACGCGACA GCGGGGCGCA AGCTCTGGTC ATCCATGCGG ACCTGTGGCC CACGCTGGCA
CCTGCCGTGC CGCCGGACGT GCGGGTGCTG GTGGTGCCCA CACCACAGGA GATCATTGAT
GCCTACGGCC TGGCGCCGGC CCCTCTGCCC GACCAGGCGC TGCAGTGGGC GCAATGGCGC
GACGGCTTCG CTCCCAGCAT GACGCCGCCA GTCCCATCGC CGGGCAGCAT GCTCTACACC
TCCGGCACGA CCGGCCGGCC CAAGGCCGTC ATGCGCCTGC CCGGCACACC GCCCCAGCAC
GAAGGAACCA TGCGCGTGCG CGCAATGGCC AGCCACGCCC GTGAAGGCAT GCGCACGGCC
CTGGTCGGCC CGCTGTACCA CGCCGGGCCC AATACCGCCG CACGCGTGGC GCTACGGCTG
GCCGAGCGCA TCGTGGTGCT GCCGCGCTTC GATGCCGAGC AGTTGCTGCG CACAATCGAG
CAGCACCGTC TCACACACCT GTCGCTCGTG CCAGTGATGC TGGTGCGGCT GCTCAAGCTG
CCGCGTGAAG TGCGCGAGCG CTACGACCTG TCGTCCCTGG AGAACGTGAC CCACGGCGGC
TCGCCCTGCG CCCCGGAAGT GCGGCGCGCC ATCATCGACT GGTGGGGCCC CATCGTCAAC
GAGACCTATG GCTCCACGGA AATCGGCCTG GTGACCATGG TCAGCGCGCA GGAATGGCTG
CAGCGTCCGG GTACCGCTGG CCGCCCTTTC CCTGGAACGT CGGTCCGCAT CCTTGGCCCC
GAGGGCCAGA TCCTGCCTCC GGGAGAAACC GGCGAGATCT ACGTCGACCC GGGCGACAAC
GCCCTGCCCT TCACCTATCG CAACGACGCG GCCGCCCGTC AGGCCATCGA GCGCGACGGG
CACATCACCA ACGGCGATAT GGGCTACCTC GACGCGGACG GCTACCTCTA CGTCACCGAC
CGCAAACGCG ACATGGTGAT TTCCGGCGGG GTCAACATCT ATCCGGCAGA AATCGAGCAC
GTGCTGGTGA CGCATCCGGA AGTCGCCGAC TGCGCGGTAT TCGGCATTCC CGATGCCGAG
TACGGCGAAG CGCTGGCCGC CGCCGTGGTG CGATCGCCAG GCAGCAGCTT GGACGCGGAG
CAGGTGCGCG ACTGGATGCG CCAACGCATG GCCGGCTACA AGGTGCCGCG GCACGTGGAA
TTCCATGCGG CGCTGCCGCG TGAAGGTATG GGCAAGGTGT TCAAGAACCA GTTGCGCGCC
CCGCACTGGG AACGCGCCGG CCGCCGCATC TGA
 
Protein sequence
MNPNLLIYNG GLILPGTQLQ AQADRAAAGF EQLGLRAGDT VAVMLRNDVP YLELMLALNQ 
LGIHLVAVNW HFQAEEAAYV LRDSGAQALV IHADLWPTLA PAVPPDVRVL VVPTPQEIID
AYGLAPAPLP DQALQWAQWR DGFAPSMTPP VPSPGSMLYT SGTTGRPKAV MRLPGTPPQH
EGTMRVRAMA SHAREGMRTA LVGPLYHAGP NTAARVALRL AERIVVLPRF DAEQLLRTIE
QHRLTHLSLV PVMLVRLLKL PREVRERYDL SSLENVTHGG SPCAPEVRRA IIDWWGPIVN
ETYGSTEIGL VTMVSAQEWL QRPGTAGRPF PGTSVRILGP EGQILPPGET GEIYVDPGDN
ALPFTYRNDA AARQAIERDG HITNGDMGYL DADGYLYVTD RKRDMVISGG VNIYPAEIEH
VLVTHPEVAD CAVFGIPDAE YGEALAAAVV RSPGSSLDAE QVRDWMRQRM AGYKVPRHVE
FHAALPREGM GKVFKNQLRA PHWERAGRRI