| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3872 |
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| Symbol | |
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| ID | 4694277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 4267520 |
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| End bp | 4268332 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639851620 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_998598 |
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| Protein GI | 121610791 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.259898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTGC AACTGAACGG CAAGGTCGCC TTCGTCACCG GCGCGGGCCA GGGCGTGGGC
CGCCGCATCT GCCTGGACCT GGCCGCAGAA GGCGTACGCG TCGCCGTCAA TGATCTGTTC
GAGGAGCGCG CCCGCACCGT CGTGCGCGAG ATCGAGGCCA TCGGCGGGCA GGCCCATGCC
GCCGTAGCCG ACATCACGCA GGAGCAACAG GTTCACGCCG CCATCGCCGC CGCCGAACAG
GCGCTCGGCC CCATCGACAT CCTCGTCAAC AACGCTGGCG TGCTGGTCGA GCGGCGCGAG
AAAGGCGGCC CCGCTCCTCT TTTCGTGGAA ACTGATTCAG AGGGCTGGAA ACGCATCGTC
GACCTCAACG TCTTCGGCAT GTTGCACTGC TGCAAGGCCG TATTGCCCGG CATGCGCGAA
CGCAGCCACG GCAAAATCAT CAACATCATG TCCGAGGCCG GCCGGGCCGG CGAAGCCCGG
CTGGCCGTCT ACTCCGGCGC CAAGGCCGCG ATGCTGGGCT TCGCCAAGGC CATCGCGCGC
GAACACGGCC AGCACTGCAT CAACGTCAAT GTAATCGCGC TGGGAGCGGT CTCGCACGAA
GGCATCCGCG AAGGCGCCCT GGCACCCACT TCCACGCCGC AGAACAACGA GCGCCTGTCC
AAAATGCTGA ACGCCTATCC GATCGCGCGC GGGCTGCAGC GCCTGGCGTG CCCGGAAGAC
GTCTCCGGCA TGGTGTGCCT GCTGGCATCA GATCGCGCGG CCTTCGTGAC CGGCCAGAGC
ATAGGCATCA GCGGCGGCTT CGTGATGCAG TGA
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| Protein sequence | MDLQLNGKVA FVTGAGQGVG RRICLDLAAE GVRVAVNDLF EERARTVVRE IEAIGGQAHA
AVADITQEQQ VHAAIAAAEQ ALGPIDILVN NAGVLVERRE KGGPAPLFVE TDSEGWKRIV
DLNVFGMLHC CKAVLPGMRE RSHGKIINIM SEAGRAGEAR LAVYSGAKAA MLGFAKAIAR
EHGQHCINVN VIALGAVSHE GIREGALAPT STPQNNERLS KMLNAYPIAR GLQRLACPED
VSGMVCLLAS DRAAFVTGQS IGISGGFVMQ
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