| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3851 |
|---|
| Symbol | |
|---|
| ID | 4695313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4248202 |
|---|
| End bp | 4249158 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639851600 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_998578 |
|---|
| Protein GI | 121610771 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0735009 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.618914 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTCAC GTCTGCTGCA TGGGCTGCTG CCGGTAGCCG GGGCTGTGCT GGCCGTTTCC
ATGGTCAGTT TCGCGCTGGT TGCCTTTCTG CCGGGCGACC TTGCTCTGAT CATGCTCGGG
GATTCGGCCA CTCCGGAATT GCTGGCGGCT GCCCGCCAGC AACTCGGCCT GGACCGACCG
CTGTACGAGC GCTATCTGCA GTGGCTGGGG CGGGCGTTTC AGGGCGACTT CGGGCGTTCC
ATGCGTTCGG GTGAACCGGT GCTCGATGCG ATCGGGGCGC GGCTACCGGT CACCCTCGAA
CTGATGGTGC TGACCGTGCT CGTCTCGCTC AGCCTGTCGA TTCCACTTGG CGTCTGGTCA
GCCTACCGGC AGGGCCGGGT TGTTGACCGG GCCACCATGA GCGTCTCTCT GGTGTTCCTG
TCTTCGCCCT CGTTTTTGGT AGGCGTGTTG TTGATCTACT TCGTGGCGCT GAAATTGCAA
TGGCTGCCGG CGTCCGGCTT CGTTCCGCTT GGCGAAAGCG TGTCGGGCAA TCTCAAATCC
ATGGTGCTGC CGGTGCTGGC GCTGGCTTTG CACGACTTAC CGATCTACGT GCGCGTGCTG
CGCAGCGAAA TGATCCAGAC GCTGCAACAG AATTTCATCC TGCTGGCGCG TGGCATGGGT
CTGTCGGTGG TGCGCATCTT GGTCGGCAAT GCTCTGCGGC CGGCTTCGCT GAACCTGGTT
ACCACAGTGG GGCTGAACGT TGGGCGCATG CTCGGCGGCG CGCTGACCAT CGAGGTGCTG
TTTGGTCTGC CCGGCCTGGG ACAGCTGCTT GTCGAATCCA TCTACCAGAA GGAGTTTCTC
GTGATGCAGG CGATCGTGCT TTTTGTCGCC ATCAGTTTCA TCGCCATCAA CCTGCTGGTG
GACCTCATCT ACTTCCTGCT CGACCCGCGA CTGCGCGATG AACGGGGGGG CGCATGA
|
|---|
| Protein sequence | MLSRLLHGLL PVAGAVLAVS MVSFALVAFL PGDLALIMLG DSATPELLAA ARQQLGLDRP
LYERYLQWLG RAFQGDFGRS MRSGEPVLDA IGARLPVTLE LMVLTVLVSL SLSIPLGVWS
AYRQGRVVDR ATMSVSLVFL SSPSFLVGVL LIYFVALKLQ WLPASGFVPL GESVSGNLKS
MVLPVLALAL HDLPIYVRVL RSEMIQTLQQ NFILLARGMG LSVVRILVGN ALRPASLNLV
TTVGLNVGRM LGGALTIEVL FGLPGLGQLL VESIYQKEFL VMQAIVLFVA ISFIAINLLV
DLIYFLLDPR LRDERGGA
|
|---|
| |