| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3718 |
|---|
| Symbol | |
|---|
| ID | 4691833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 4110769 |
|---|
| End bp | 4111728 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639851473 |
|---|
| Product | Allergen V5/Tpx-1 family protein |
|---|
| Protein accession | YP_998451 |
|---|
| Protein GI | 121610644 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAACA TCAAGATCAC GCTGGCGATG GCAGCAACTG CCGCGATGCT GGCCGCCTGT
GGTGGCGGTG GCAGCAGCAA TGAAGGCCAA AACCCCGGCG TGTCGGGCAC ACCGCCTGCT
GCGGACACCC TGAACCGCAC CAACACCCCT GGCGTGTATG CCGACAGCGC GCGCAAGTAT
GCGTTCGACG CGCTCAATCA GGTGCGCGGC ATCACGGGCG TGGGCTTTCT CAAGCAGAAC
GAGGCGCTGG ACAAGGCGGC GCAGGCGCAT GCGGATTACG GCAGACTGGC TGGACTGAAT
CCTGTTGATG TTGAACATAC CGAGAATCCT GGGTATGCAG GCTTCACAGG CAAAACACCG
GACGAGCGTG CTCGGCATTT TGGCTATACG TATGGCGCAT CCGAAGTATT GTCTGGTGGC
GTTAACGACA TGCAATCTTT TTGGAGTTTA CTTGGAGTGC CGTATCACTC CATCAACATG
CTGGATACTT ATGCAGACAT TGGAGTGGGT GTTTGGCCGA AGGTGATCCT GGTGATGAAT
CCTGGAAATT ACTTCGCACA ACTTTTGGAT GGATCCTTTG TGGCGGTATA TCCATGCAAT
GACATACAGG TCAACGTGCA GGGGCAGGGA TATGAGACGC CGCAGCCGTC TGTTCTGAAT
GGCAAGGAAG ATTTTGGCTA CAGCAGCGTA GCACTCGTTC GCATGGGACA AACTCTCGAA
GTCAGTTCAT GGGAACTTCG TGATGCAAGC GGGAATGTGG TTCCAACGAC ACTGATGACG
AAGGCCAACG ATGCGAATAA GATGATTCTC GCAAACCAAG CCAGCTTGAT TCCGTTGAAC
GCATTGCCCC GTACCGTGAC CACTTACACC AGCGTCCTCA AAGGCAAGAA CAATGGCGTG
CCGTTCGAGA AGACTTGCAC TTGGCGCACC GTGGTCGGGG AGACAGTGCC GTCGAACTGA
|
|---|
| Protein sequence | MKNIKITLAM AATAAMLAAC GGGGSSNEGQ NPGVSGTPPA ADTLNRTNTP GVYADSARKY
AFDALNQVRG ITGVGFLKQN EALDKAAQAH ADYGRLAGLN PVDVEHTENP GYAGFTGKTP
DERARHFGYT YGASEVLSGG VNDMQSFWSL LGVPYHSINM LDTYADIGVG VWPKVILVMN
PGNYFAQLLD GSFVAVYPCN DIQVNVQGQG YETPQPSVLN GKEDFGYSSV ALVRMGQTLE
VSSWELRDAS GNVVPTTLMT KANDANKMIL ANQASLIPLN ALPRTVTTYT SVLKGKNNGV
PFEKTCTWRT VVGETVPSN
|
|---|
| |