Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3673 |
Symbol | |
ID | 4690424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 4060386 |
End bp | 4061363 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639851429 |
Product | Allergen V5/Tpx-1 family protein |
Protein accession | YP_998407 |
Protein GI | 121610600 |
COG category | [S] Function unknown |
COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0308491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.595452 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAGAACA TCAAGATCAC GCTGGTGATG ACAGCAACTG CTGCGATGCT GGCCGCCTGT GGTGGCGGTG GTTCAGATAC GCCTGCGGTG GTTACGCCTG CTCCAGATAC GCCTGCGGTG GTTACGCCTG CGGTGACAGC GGACACCCTG AACCGTACCA ACACCCCCGG CGTGTATGCC GACAACGAAC GCAAGTACAT GTTCGACATG CTCAATCAGG TGCGCGGCAT CACGGGCGTG GGCTTTCTCA AGCAGAACGA GGCGCTGGAC AAGGCGGCGC AGGCGCACGC GGAATATCGC TGGATGAACC CCGGAGAATC GGGTCATACT GAAAAAATCG ACTACGCTGG ATTCACTGGA GAAACTCCTG CAGACCGTGC CAGACACTTC GGATATGCAG GGTATGCATC TGAATCCGTG GTTGGCAGCA TTACTGCCAT GGGCGCCATC AATAGACTGC TTGGAGGGCC CTACCATGCC AGACACTTGC TTTGGGATGA TAACGACCTC GGCACTGGCA GGGTATCCAG TGGCTTACAT ACCGTGGTTA CTGGCACTAA TTCATGGAAT GATCGCCAAA AACTCGCCGG CGATCAGATT GCAATGTATC CATGCAACAA CATTCAAGTG AATGTACAGG GCCAAGGCTA CGAGACGCCA ACCCCAGCCG TCTTGAATGG CAAGGATGAT TTCGGTTACA GCAGCATGGC CATTGTTCGT CGCGGTCAGA CCCTGGTGGT TGACGCCTGG GAACTGCGCG ATGCGGCCGG TAATCTGGTT CCGACCGTGG TGATGACGGG GGCCAACGAT ACGCTCAAGT ATTTCTCGAA TCACGAGGCC GCACTGATCC CGCTGAACGC ATTGCCCCGT ACCGTGACCA CTTACACCAG CGTCCTCAAA GGAAAGAACA ATGGCGTGCC GTTCGAGAAG ACTTGCACTT GGCGCACTGT GGCCGGTGAG ACAGTGCCGT CGAACTGA
|
Protein sequence | MKNIKITLVM TATAAMLAAC GGGGSDTPAV VTPAPDTPAV VTPAVTADTL NRTNTPGVYA DNERKYMFDM LNQVRGITGV GFLKQNEALD KAAQAHAEYR WMNPGESGHT EKIDYAGFTG ETPADRARHF GYAGYASESV VGSITAMGAI NRLLGGPYHA RHLLWDDNDL GTGRVSSGLH TVVTGTNSWN DRQKLAGDQI AMYPCNNIQV NVQGQGYETP TPAVLNGKDD FGYSSMAIVR RGQTLVVDAW ELRDAAGNLV PTVVMTGAND TLKYFSNHEA ALIPLNALPR TVTTYTSVLK GKNNGVPFEK TCTWRTVAGE TVPSN
|
| |