Gene Veis_3645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3645 
Symbol 
ID4692814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4029505 
End bp4031067 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content71% 
IMG OID639851400 
Producthistidine ammonia-lyase 
Protein accessionYP_998379 
Protein GI121610572 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT CCAACACTTC CCCACTGCTG CTGCAACCCG GCCATGTCAC CCTGGCCGGG 
CTGCGCCGCA TCCATGCCGG CCCGGTACGA CTGGCGCTGG ACGCACCGGC CCGGGCGGCC
ATGCAGGCCG CGCAGGCGGC GGTGCAGCGC ATCGTGGCGG CAGACCGGGT GGTCTATGGC
ATCAACACCG GTTTTGGCAA GCTGGCCAGC ACCAGGATTG CTGCCGAGCA CCTGACCGAG
TTGCAGCGCC GCCTGGTGCT GTCGCACAGC GCGGGCACCG GGCCGGCGCT GCCCGACGCG
GTGGTGCGCC TGGTGCTGGC CACCAAGGCC GTGGGCCTGG CGCGCGGCCA CTCCGGCATC
CGCCCCGAGA TCGTCGATGC GCTGCTGGCG CTGGCCAGTG CCGAGGTGCT GCCGGTGATT
CCGGCCAAAG GCTCGGTCGG GGCCTCGGGG GATCTGGCGC CGCTGGCGCA TCTGGCCTGC
GTGCTGATCG GGCAGGGGCA GGCCCAATGC AACGGCACGC TGGTGCCGGG CGCCGAGGCG
ATGCGCGCCA TCGGTTGCCA GCCCTTCGTG CTCGGCCCGA AGGAGGGGCT GGCGCTGCTC
AACGGCACGC AGGTGTCGAC CGCGCTGGCG CTGGCGGGCC TGTTCGGCGC CGAGAACCTG
CTGGCCGCTG CGCTGGTGGC CGGCGCGCTA TCGCTGGAGG CCATCAAAGG CTCGGTCTGG
CCGCTGGATG CGCGCATCCA TGAAGCCCGC GGCCAAGCCG GGCAAATCGC CGTGGCCGCC
GCGTTGCGCG CGCTGCTCGA AGGCAGCGCC ATCGCCGCTT CGCACCCGCA CTGTGGCCGC
GTGCAAGACC CCTACTCGAT CCGCTGTATG CCGCAGGTGC TGGGCGCTTG CCTGGACAAC
CTGCACCACG CGGCGCGCGT GCTCGTCATC GAAGCCAATG CGGCATCGGA CAACCCGCTG
GTCTTTGCCG CAGCGCAGGG CGGCCCGGGT GCGGACGAGG TGATCTCCGG CGGCAACTTC
CACGCCGAGC CGGTGGCCTT TGCTGCCGAC ATCATGGCGC TGGCGGTGGC CGAGATCGGC
GCCATGTCCG AACGGCGCCT GGCGCTGCTG CTCGACACCG GCCTGTCGGC ACTGCCGGCC
TTTCTGGTGC GCGACAGCGG CATGAACTCG GGCTTCATGA TGGCGCAGGT CACCGCCGCT
GCGCTGGCGA GCGAGAACAA ATCGCTGGCC CACCCGGCCA GTGTCGACAG CCTGCCCACA
TCGGCGAACC AGGAAGACCA TGTGTCCATG GCCACCTTCG GCGCGCGCCG CCTGGCCGAG
ATGATCGACA ACACGGCGAC GGTGGTGGGC ATCGAGGCCA TGGCGGCGGC GCAGGGCATG
GAGTTCGATC GCAGCCTGCG CTCGACGCCG CTGCTCGAAG GGCAGTGGGC CGCGATTCGC
GAGCGCGTGG CCTTTCTGGA GCAAGACCGC TGCCTGGCGC CCGATATAGC CGCCATGCGG
CTGTGGGCGC AGCAATCCGG GTGGCCCGCG CCGCTGTTGC AGTGCCTGCC CAGCCATGCC
TGA
 
Protein sequence
MTESNTSPLL LQPGHVTLAG LRRIHAGPVR LALDAPARAA MQAAQAAVQR IVAADRVVYG 
INTGFGKLAS TRIAAEHLTE LQRRLVLSHS AGTGPALPDA VVRLVLATKA VGLARGHSGI
RPEIVDALLA LASAEVLPVI PAKGSVGASG DLAPLAHLAC VLIGQGQAQC NGTLVPGAEA
MRAIGCQPFV LGPKEGLALL NGTQVSTALA LAGLFGAENL LAAALVAGAL SLEAIKGSVW
PLDARIHEAR GQAGQIAVAA ALRALLEGSA IAASHPHCGR VQDPYSIRCM PQVLGACLDN
LHHAARVLVI EANAASDNPL VFAAAQGGPG ADEVISGGNF HAEPVAFAAD IMALAVAEIG
AMSERRLALL LDTGLSALPA FLVRDSGMNS GFMMAQVTAA ALASENKSLA HPASVDSLPT
SANQEDHVSM ATFGARRLAE MIDNTATVVG IEAMAAAQGM EFDRSLRSTP LLEGQWAAIR
ERVAFLEQDR CLAPDIAAMR LWAQQSGWPA PLLQCLPSHA