| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3612 |
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| Symbol | |
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| ID | 4692530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 3996351 |
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| End bp | 3996911 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639851366 |
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| Product | peptide deformylase |
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| Protein accession | YP_998347 |
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| Protein GI | 121610540 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.303714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATCC ACCGCATCCT GAAAATGGGC GACCCCCGCT TGCTGCGCAT TGCCCGGCCG
GTGACCGGGT TTGACACCGA GGCCCTGCAT GGCCTGGTGC GTGACATGCT CGACACCATG
CATGACGCCA ATGGCGCCGG GCTTGCGGCG CCGCAGATCG GCGTGGATTT GCAGCTCGTG
GTCTTTGGCT CCGGCGAGCA CAACCCGCGC TACCCGGGCC GGCCACCGGT GCCGCTCACC
GTGCTGCTGA ACCCGGTGAT CACGCCCTTG GGCCAAGACG AGAAAGAGGA CTGGGAGGGC
TGTCTTTCCG TGCCCGGTTT GCGTGGCATG GTGCCGCGTT GGTCGCGCAT CCGTTACACG
GGTGTCGATC CGTATGGCCA TCCGATCGAT CGCTCGGTCG ATGGTTTTCA TGCCCGCGTG
GTGCAGCATG AATGCGATCA CCTCGTTGGC AAGCTGTACC CGATGCGGGT GCGGGATTTC
AGGCAGTTTG GCTTCACGCA GGTCCTGTTT CCGGACACCC GGGCCGCCGA AGACGATGGC
GTGGAGGCGC TGGATGGCTG A
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| Protein sequence | MTIHRILKMG DPRLLRIARP VTGFDTEALH GLVRDMLDTM HDANGAGLAA PQIGVDLQLV
VFGSGEHNPR YPGRPPVPLT VLLNPVITPL GQDEKEDWEG CLSVPGLRGM VPRWSRIRYT
GVDPYGHPID RSVDGFHARV VQHECDHLVG KLYPMRVRDF RQFGFTQVLF PDTRAAEDDG
VEALDG
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