| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3599 |
|---|
| Symbol | |
|---|
| ID | 4691872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 3976100 |
|---|
| End bp | 3978703 |
|---|
| Gene Length | 2604 bp |
|---|
| Protein Length | 867 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639851354 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_998335 |
|---|
| Protein GI | 121610528 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.177428 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTCG ACAAATTCAC CACCAAATTC CAGGAGGCAT TGAGCGATGC CCAAAGCCTG
GCGCTGGGCA ATGACCACGC CTACATCGAG CCGGTGCACC TGCTCGCGGC CATGCTCAGG
CAGGCCGATG GTCCCAGGGC CTTGTTGCAG CGTGCCGGCG CCAATGTGCC TGGCCTGCTG
GCAGCGGCCG AGGCGGCCGT CAAACGCCTG CCCCAGGTGC AGGGCAATGA GCAGGTGCAG
GTCGGGCCCG AACTGGGCCG TGTGCTGCAG GCCACCGAGA AAGAGGCCAT CAAGCGCGGC
GACCCGTTCA TTGCCAGCGA ATTGTTCCTG CTGGCCGTGA TCGACAGCAA GGGCGAGGCG
GCGCAACTGG CCAAAGAGCA TGGCCTTGCG CGCAAGAGTC TGGAGGCCGC GATCGAGGCC
GTGCGCGGCG GCCAGAAGGT GGACAGCGCC GAGGCCGAAG GCCAGCGCGG TGCGCTCGCC
AAATACTGCC TGGACCTGAC CGAGCGCGCG CGCTTGGGCA AGCTCGACCC GGTGATCGGC
CGCGACGATG AAATCCGCCG CGCGATCCAG GTGCTGCAGC GCCGCACCAA GAACAACCCG
GTGCTGATCG GCGAGCCTGG CGTGGGCAAG ACGGCGATCG TCGAAGGTCT GGCCCAGCGC
ATCGTGGCCG GCGAGGTGCC CGAGTCGCTC AAGGGCAAGC GCGTGCTGTC GCTGGACATG
GCGGCGCTGC TGGCCGGCGC CAAGTTCCGT GGCGAATTTG AAGAGCGCCT GAAAGCCGTG
CTCACCGAAC TGGCCAAGGA CCAGGGGCAG ACCATCGTCT TCATCGACGA GTTGCACACC
ATGGTCGGCG CCGGCAAGGC CGAAGGGGCG ATGGACGCGG GCAACATGCT CAAGCCCGCG
CTCGCGCGTG GCGAACTGCA CTGCGTGGGC GCGACCACGC TCGACGAGTA CCGCAAGTAC
ATCGAAAAAG ACGCTGCGCT GGAGCGGCGT TTTCAGAAGA TCCTGGTCGA CGAGCCGACG
GTCGAGGCGA GCATTGCCAT CTTGCGCGGC TTGCAGGAAA AGTACGAGGT GCACCATGGC
GTGGACATCA CCGACCCGGC CATCGTGGCC GCCGCCGAAC TGTCCAACCG CTACATCACC
GACCGCTTTT TGCCCGACAA GGCGATCGAC CTGATCGACG AGGCGGCCTC CAAGATCAAG
ATCGAGATGG ATTCCAAGCC CGAGGTGATG GACAAGCTCG ACCGCCGCCT GATACAGGTA
CAGATCGAGC GCGAGGCGGT GCGCCGCGAA AAGGATGAAG CCTCGCAAAA GCGCCTGGCG
CTGATCGAGG AGGAGATAAC CCGGCTGCAA AAGGAAATCG CCGATTACGA CGAGATCTGG
CAGGCGGAAA AAGCCCAGGC GCAGGGCAGC GCGCAACTGC GCGAAGCCAT TGACAAGCTC
AGGTTCCAGA TCGAGGAATT CACCCGCAAG GGCGACTTCA ACAAGGTGGC CGAACTGCAA
TACGGCCAGT TGCCCGCGCT GGAAAAGCAG CTCCGGCAAG CACAGGCCCA GGAAGCGGGC
AAGGACGGCG CGCCGGCCAC CCGCCGCCTG CTGCGCACGC AGGTGGGGGC CGAGGAAATC
GCCGAGGTGG TCAGCCGCGC CACCGGCATC CCGGTGGCCA AGATGATGCA AGGCGAAAAA
GACAAGCTGC TGCAGATGGA AGCCAGGCTG CACCAGCGTG TGGTGGGCCA GGACGAGGCG
ATCGCCGCCG TGGCCAACGC CATCCGCCGC TCGCGCTCGG GCCTGTCGGA CCCGCAGCGT
CCCAGCGGCA GTTTTCTGTT CCTGGGCCCC ACGGGCGTCG GCAAAACCGA GTTGTGCAAG
GCGCTGGCGG GCTTTTTGTT CGACAGCGAA GACCACATGG TGCGCATCGA CATGAGCGAG
TTCATGGAAA AGCATTCCGT GGCCCGCCTG ATCGGCGCAC CCCCCGGTTA CGTGGGCTAT
GAGGAGGGCG GCTATCTGAC CGAGGCCGTG CGCCGCAAGC CCTACAGCGT GCTGCTGCTC
GACGAGGTGG ACAAAGCCCA TCCCGACGTG TTCAACGTGC TGCTGCAAGT GCTCGACGAT
GGCCGTTTGA CCGACAGCCA GGGCCGCACC GTGGACTTCA AGAACACGGT GATCGTGATG
ACCAGCAACA TCGGCTCGCC GCTGATCCAA GCCATGGTGG GCCAGGACCC GCAGGACATC
AAGGACGCGG TGTGGGGGGA ACTGAAGAAC CATTTCCGGC CCGAATTCCT GAACCGGATC
GACGAGACGG TGGTGTTCCA CGCGCTCGAT GCGCAGCATA TTGCGTCGAT CGCGCGGATA
CAGTTGCAGT CGTTGCAATC CCGGCTGGCG AAGATGGACT TGCAATTGCA GGTCTCGGAC
GCCGCTGTGG CAGAGTTGGC CAAGGTGGGG TTCGATCCGG TGTTCGGCGC GCGGCCGCTC
AAGCGGGCGA TACAGCAGCG CATCGAAAAC CCGCTGTCCA GGCTGCTGCT GCAAGGGCAA
TTCCCGCCCA AGAGCGTGAT CGCGGTCAGC GTGAACCCGA TGCTCGATCC GGGGGTGTTC
CAGTTCGGCG CTGCGCCGCA GTGA
|
|---|
| Protein sequence | MRLDKFTTKF QEALSDAQSL ALGNDHAYIE PVHLLAAMLR QADGPRALLQ RAGANVPGLL
AAAEAAVKRL PQVQGNEQVQ VGPELGRVLQ ATEKEAIKRG DPFIASELFL LAVIDSKGEA
AQLAKEHGLA RKSLEAAIEA VRGGQKVDSA EAEGQRGALA KYCLDLTERA RLGKLDPVIG
RDDEIRRAIQ VLQRRTKNNP VLIGEPGVGK TAIVEGLAQR IVAGEVPESL KGKRVLSLDM
AALLAGAKFR GEFEERLKAV LTELAKDQGQ TIVFIDELHT MVGAGKAEGA MDAGNMLKPA
LARGELHCVG ATTLDEYRKY IEKDAALERR FQKILVDEPT VEASIAILRG LQEKYEVHHG
VDITDPAIVA AAELSNRYIT DRFLPDKAID LIDEAASKIK IEMDSKPEVM DKLDRRLIQV
QIEREAVRRE KDEASQKRLA LIEEEITRLQ KEIADYDEIW QAEKAQAQGS AQLREAIDKL
RFQIEEFTRK GDFNKVAELQ YGQLPALEKQ LRQAQAQEAG KDGAPATRRL LRTQVGAEEI
AEVVSRATGI PVAKMMQGEK DKLLQMEARL HQRVVGQDEA IAAVANAIRR SRSGLSDPQR
PSGSFLFLGP TGVGKTELCK ALAGFLFDSE DHMVRIDMSE FMEKHSVARL IGAPPGYVGY
EEGGYLTEAV RRKPYSVLLL DEVDKAHPDV FNVLLQVLDD GRLTDSQGRT VDFKNTVIVM
TSNIGSPLIQ AMVGQDPQDI KDAVWGELKN HFRPEFLNRI DETVVFHALD AQHIASIARI
QLQSLQSRLA KMDLQLQVSD AAVAELAKVG FDPVFGARPL KRAIQQRIEN PLSRLLLQGQ
FPPKSVIAVS VNPMLDPGVF QFGAAPQ
|
|---|
| |