Gene Veis_3597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3597 
Symbol 
ID4690477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3973713 
End bp3974672 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content63% 
IMG OID639851352 
Productinner-membrane translocator 
Protein accessionYP_998333 
Protein GI121610526 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.811202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0646948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGGC GTTCGATGTC GATACGGTTC GGTCAATCGG GCTCGCTCGT TCTGGCGCTG 
GTGCTGGCCA CGCTTTGCAT CGCCATCTCG GCCGCAGAGC CACGATTTCA TTCCGGGGCC
AACATCATCG CCATCTTGCG CCAATGCGCC TTGGTGTTGA TCGCTGCGTG CGCAATGACC
ATGCTCGTCA TTGCCGCCGA GGTCGATTTG TCGGTCGGTG CCTCGCTGGC CTTTGTCGGT
TGCATCGGCA TGGCCGTGCT CAATGCGACG CATAGCCTTG CGCTGGGCAT GTTGGCGGCG
CTGGCTTTTG CCGGCGGGGT CGGCCTTGCC AACGGTTTGA TCGTCACGCG CCTGAAAGTC
AATTCACTGA TCGCCACGAT CGGCACCATG ATGATGCTGC AAGGCGGCGT CTATCTTTTC
ACCCGCGAGG CGGTGCAGAA CCAGCACCAG TTGGCGGGGT TTACCGCGCT CGGCGCGGGC
CATGCCGGGG TGGTGCCAAT TCCGGTCATC GTCGCGGCGG TGATTTTCCT GATCGCCTGG
ATGACGCTGC GCCTGACGGT GCTGGGGCGT TTCATCTACG CCGTCGGCGC CAACGAAAGG
GCGCTGCGCC TGTCGGGTGT CCGTTCCGAA CGGCTGAAAC TGTTCGCCTT TGTCCTGACC
GGCCTGTGCG TCGGCGTGGC CGGCATGATC CTGTCGTCGC TGATGAATGC CGGTCAGCCG
ACGGCCGGGC GCGGCTTCGA GCTCACGGTC ATTGCCGCTG TCATTCTGGG CGGAACCAGC
CTGGCTGGCG GTCGCGGCTC TCTTTTCGGC ACATTGCTCG GTGTGTTGGT GCTGAAAGTC
ATCGACAACG GCATCATCCT CCTCGGCTGG AACCAGGACT TGCAGATGAT CGTGCCGGGC
GTCGTCATCA TTTTGGCGAC CTATCTCGAT GTCGTGCGGA GCAAAGCCAA TGCCCGCTGA
 
Protein sequence
MPRRSMSIRF GQSGSLVLAL VLATLCIAIS AAEPRFHSGA NIIAILRQCA LVLIAACAMT 
MLVIAAEVDL SVGASLAFVG CIGMAVLNAT HSLALGMLAA LAFAGGVGLA NGLIVTRLKV
NSLIATIGTM MMLQGGVYLF TREAVQNQHQ LAGFTALGAG HAGVVPIPVI VAAVIFLIAW
MTLRLTVLGR FIYAVGANER ALRLSGVRSE RLKLFAFVLT GLCVGVAGMI LSSLMNAGQP
TAGRGFELTV IAAVILGGTS LAGGRGSLFG TLLGVLVLKV IDNGIILLGW NQDLQMIVPG
VVIILATYLD VVRSKANAR