Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3590 |
Symbol | |
ID | 4693388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3966337 |
End bp | 3967182 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639851345 |
Product | SMP-30/gluconolaconase/LRE domain-containing protein |
Protein accession | YP_998326 |
Protein GI | 121610519 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.118622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAC CGTTGCTCGA AATGTCGGCC GCGAAAGTTT TCTTCGACGG CATCTTCACC AGCCCGCGCG TCGCGCACCC GGAGGGCGTG GCCGTCCACC GCGACGGATC CATCTGGTGC GGCACCGAAA CCGGCGATTT GCTGCGGCTG GCCGCCGATG GTGCTTCGGT CGAGCGCATG GGTGGCACGC AAGGGTTTCT GCTCGGCATT GCCTTCGACG GTGCCGGGAA CTGTTTTGCC TGCGATTGGA AGCACTCGGC GATCTTTCGC CGGGATGCCG GGACAGCGCA GATGGAACGC TTTGCTTCGG CGGGCATCCG CGTGCCGAAT TACCCGGTCG TCGACGAGCT GAGGGGCTGG CTCTTCGTGT CGGACAGTGT CGGCCAAGAC AACCGCTCCG GCATCTTCCG CTACGACCTG AAGACCGGCG ACGGCGGCCT GTGGTGCCGC GAGGCCATGT CCTTTGCCAA TGGCATGGCC ATGGCGCCGG ATGGCAACGG CCTGTATGTG GTGGAAAGCA ATGCACCGTG CATCAGCTAT GTGCCGATCC TCGCCGACGG TGCGCCCGGA GCCCGGCGGG TCGTCGTCGA GGGGGTGCAC AACGTTCCGG ACGGCGTGGC CTGCGCGCCC GACGGTTCGC TGTTCATTTC ATGCTACGAG CCAAGCCGGA TTTATCGCTG GCGCAAAGAT CGGGGTCTCG AAGTGCTGAT GGAGGATCCG ACAGCGACCA CGCTGGCGCA TCCCACCAAC ATCGCCTTCA AGGGCGACAA ACTCTACACG GCAAATCTTG GCCGCTGGCA CATCACCGAG ATCGATCTGG CCGCCCTTGC CAGCCCGGGC CGCTGA
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Protein sequence | MAKPLLEMSA AKVFFDGIFT SPRVAHPEGV AVHRDGSIWC GTETGDLLRL AADGASVERM GGTQGFLLGI AFDGAGNCFA CDWKHSAIFR RDAGTAQMER FASAGIRVPN YPVVDELRGW LFVSDSVGQD NRSGIFRYDL KTGDGGLWCR EAMSFANGMA MAPDGNGLYV VESNAPCISY VPILADGAPG ARRVVVEGVH NVPDGVACAP DGSLFISCYE PSRIYRWRKD RGLEVLMEDP TATTLAHPTN IAFKGDKLYT ANLGRWHITE IDLAALASPG R
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