| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3579 |
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| Symbol | |
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| ID | 4691911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 3957273 |
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| End bp | 3958892 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639851334 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_998315 |
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| Protein GI | 121610508 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000745521 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.65455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACT ACGACTACAT CATCGCCGGC GGCGGCTCCG CCGGTTGCGT ACTGGCCAAC
CGGCTGAGCG CTGACCCGTC GGTCAGCGTG TTGCTCATCG AGGCCGGAGG GCCGGACCGG
CACCCGCTGT TCCACTGGCC TGCCGGCTTT GCCAAGATGA CCAAGGGCAT TGCCTCCTGG
GGCTGGAGCA CGGTGCCGCA AAAGCACCTG CAAGGCCGGG TGCTGCGCTT TACCCAGGCC
AAGGTCATCG GAGGCGGCTC ATCGATCAAT GCCCAGCTCT ACACCCGTGG CGCCGCCGCA
GATTACGAGA CCTGGGTGCG GGACGCGGGC GCGCTCGGCT GGGGCTATGC CGACGTGCTG
CCGTATTTCA AACGCTCGGA AAACAACCAG CGCTTTGCCA ACGAGCACCA CAGCTATGGC
GGCCCGCTCG GGGTGTCCAA CCCGGTCAGC CCATTGCCCA TTTGCGAAGC CTTTTTTCAG
GCCGGGCAGG AGCTTGGCAT CCCGTTCAAT GCCGATTTCA ACGGCGCCGC CCAGGATGGC
CTGGGCTACT ACCAACTGAC GCAGTTGAAC GCCCGCCGCT CATCGGGCGC GACCGCCTTT
CTGAACCCGG TCAAACAGCG GCCGAATTTG ACGATCAAGC TGCACACCCG GGTGCTGAAA
GTCCTGCTCG AAGGCCCGCG CGCAAGCCGC CGCGCAGCGG GTGTCACCTT GGTGACAGGC
AAAAGCCGCA GCCCGGCGAC CCTGCGGGCT CACCGCGAGG TGATCGTCTC GTCAGGCGCG
ATCGGCTCGC CCCAATTGCT GATGCTGTCA GGCATAGGCC CGGGCGCGCA TTTGCGCAGC
CTGGGATTGG ACGTGGCCCA TGACCTGCCC GGCGTGGGCG CAAACCTGCA AGACCATCTG
GACCTGTTCG TGATCGCCGA ATGCACCGGC GATCACAGCT ACGACAAATA CGAGCGCCCG
CAGCACGCGG CCTGGGCCGG CTTGCAGTAC CTGCTGTTCA AGCGCGGGCC GGTGGCATCG
AGCCTGTTCG AGACCGGCGG CTTTTGGTAC GCCGACCGCA GCCACCCGGC GCACTCGCCC
GACATACAAC TGCACCTGGG CCTGGGCTCG GGGATCGAGG CCGGCATGGC CAGGATGCAG
AACTCCGGCG TGACCCTGAA CAGCGCCTAT CTGCGCCCCC AATCCCGGGG CAGCGTGCGG
CTGGCCAGCG CCGACCCTGG CGCCGCACCA CTGATCGACC CCAACTACTG GGCCGACAGC
CATGACCGCG CAATGGCCAT CGGGGGCCTG CGGCTGGCGC GCGACATCAT GCAGCAGCCG
GCGCTCAGGC GCTATGTCAA AACCGAAGTA CTGCCCGGCG CCCGGCGACA AAGCGACCAA
GACCTGTACG ACTACGCCTG CGCCCATGCC AAGACCGACC ACCACCCGGT CGGAACCTGC
CGGATCGGCC CGGAAAGCGA CGCCCACAGC GTCGTGGCGC CAGACCTGAA GCTCATCGGC
ATCGAAGGCT TGCGCGTCGT CGATGCATCG GTGATGCCCT TCGTGCCCTC CTGCAACACC
AACGCGCCGA CCATCATGGT GGCCGAAAAA GCCGCCGACC ACATCCTTGC TCGTCTTTGA
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| Protein sequence | MENYDYIIAG GGSAGCVLAN RLSADPSVSV LLIEAGGPDR HPLFHWPAGF AKMTKGIASW
GWSTVPQKHL QGRVLRFTQA KVIGGGSSIN AQLYTRGAAA DYETWVRDAG ALGWGYADVL
PYFKRSENNQ RFANEHHSYG GPLGVSNPVS PLPICEAFFQ AGQELGIPFN ADFNGAAQDG
LGYYQLTQLN ARRSSGATAF LNPVKQRPNL TIKLHTRVLK VLLEGPRASR RAAGVTLVTG
KSRSPATLRA HREVIVSSGA IGSPQLLMLS GIGPGAHLRS LGLDVAHDLP GVGANLQDHL
DLFVIAECTG DHSYDKYERP QHAAWAGLQY LLFKRGPVAS SLFETGGFWY ADRSHPAHSP
DIQLHLGLGS GIEAGMARMQ NSGVTLNSAY LRPQSRGSVR LASADPGAAP LIDPNYWADS
HDRAMAIGGL RLARDIMQQP ALRRYVKTEV LPGARRQSDQ DLYDYACAHA KTDHHPVGTC
RIGPESDAHS VVAPDLKLIG IEGLRVVDAS VMPFVPSCNT NAPTIMVAEK AADHILARL
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