Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3578 |
Symbol | |
ID | 4693753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 3956460 |
End bp | 3957251 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639851333 |
Product | 3-ketoacyl-(acyl-carrier-protein) reductase |
Protein accession | YP_998314 |
Protein GI | 121610507 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0308491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCGCC CTGCCTTGGC CATCGTCACC GGCGCCCGCC GTGGCATCGG GGCCGCCATC GCCATCGACC TGGCAGCCCA TGGATTCGCC GTCGCCATGA CCGATCTCGC CGACCCTGCC GATACCGCCG ACCCCGGCGC CGCGCACACC CTGCACGCGA TCGAGTCGCG CGCTGGCCGG GCCCGTTTTT TCCCTTCGGA CCTGGCCCGG GTCGAGGCCC ATCCGGCGCT GGTGCAAGCC ATCGCCGATT GGGGCGGGCC GGTCGAGGTG CTGGTCAACA ACGCCGGCAT CGCCGCACCG AGCCGTGGCG ATCTGCTCGA TGTGCAGCCC CGCGCCTTCG ACGAGGTGCT GGGCGTGAAC CTGCGCGGAA CCTTCTTCAT GACCCAGGCC GTCGCGCGCC ACATGCTGCA AACGACGCCG GCGCATCCGG CACGCCCGCG CACGATAGTG ACACTGTCCT CGGTCAGCGC CGAACTGGCC TCGATCGAAC GCGCAGAGTA TTGCCTGTCC AAGTCCGGGC TGCCCATGCT CACCAAACTG TTTGCGCTGC GCCTGGCAGC GGCCGGCATC GCCGTGTTCG AGATCCGGCC CGGCATCATC CAAACGCCGA TGACGCAGCC GGTGGCCGCC CAATACGGGC AGCGCATCGC CGAAGGGCTG GTGCCCATGC AGCGCTGGGG GCAGCCCGAG GATGTGGCGC GCGCGGTGTC GGCACTGGCC AGCGGGCAGT TGGCTTTTGC CACCGGCAGC GCGCTGTCGG TGGACGGCGC GCTCTCCATT GCACGCTTAT GA
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Protein sequence | MTRPALAIVT GARRGIGAAI AIDLAAHGFA VAMTDLADPA DTADPGAAHT LHAIESRAGR ARFFPSDLAR VEAHPALVQA IADWGGPVEV LVNNAGIAAP SRGDLLDVQP RAFDEVLGVN LRGTFFMTQA VARHMLQTTP AHPARPRTIV TLSSVSAELA SIERAEYCLS KSGLPMLTKL FALRLAAAGI AVFEIRPGII QTPMTQPVAA QYGQRIAEGL VPMQRWGQPE DVARAVSALA SGQLAFATGS ALSVDGALSI ARL
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