| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3568 |
|---|
| Symbol | |
|---|
| ID | 4691874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 3944457 |
|---|
| End bp | 3945476 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639851323 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_998304 |
|---|
| Protein GI | 121610497 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA AAACGCCAGG CTTTCGGGCC GCAACCATTC TCGACGTCGC GTCGGTCGCC
AATGTCTCCA AGTCAACGGT ATCGCTGGTA TTGCGCGGCA GCGACCTGAT TCCGACGGAG
ACATCGGACC GGGTGCGCAA GGCGGCGGCC AAAATCGGCT ATGTCTACAA CCGGCGCGCA
GCAGAGCTCA GACGGCAGTC GTCCAACGCC ATCGGGGTTG TCATCAGCGA CCTGCGCAAC
CCCTTCTTTG CCGAAGTTCT GGTGGGACTC GAGCGCCGGC TTGCCGAAGC CGGCTACACC
GTCTTCATGG CGCATACCAA TGAAGACCTC GAAAGACAGC AACGGGTGCT GACCATCCTG
AGGGAGCAAG GCATTGCCGG CATTGCCATC TGTCCGGCGC TCGGAACGCC GATCTCGCTG
CCCCGGAGCG TCAAGTCCTG GGGCGTCCCG CTGGTGGTGA TGGTGCGCAC GCTGGGAGGG
GGCGCGAGCT ACGACTTCGC CGGCGCCGAC AACAGCCTGG GCGTTCGCCA GGCCATGGAC
CACCTGATCG GCAAAGGGCA CAGACGGATT GCCTTTCTGG GCGGAATCAC GGGGCCGGTG
CTGCAACAGC GCCTGGACGG TTACAAAGAG ACGTTCACTG CGCACCGCAT CAGGTTCCAC
CCGGACTTGA TCGTGACATC GCAGCCCACG CGCGAGGGCG GGCACGCCGC AATGGTGCGC
TTGCTCAAAG CCCGCAAGAG CGTCAAAGCA GCCGTTTGTT ACAACGACCT GACCGCCTTC
GGCGCGCTTT CGGCATTGGG GGACGCCGGC CTGCGCGCCG GTGTCGACTT CGATCTCATC
GGGTTTGACA ACATCCTGGA CACGATCCAT TCCAACCCGC CGCTGAGCAC GGTCGATATC
AAACCCGAGC AGATGGGGGC CGAAGCGGCA GTGCTGCTGC TGGCCCGTAT CAAGGAACCC
GGCCTGAAGG TGCAGCGCTT CATTCAAGAG CCGACCCTGG TGCTCAGGCA GTCCGGATGA
|
|---|
| Protein sequence | MSKKTPGFRA ATILDVASVA NVSKSTVSLV LRGSDLIPTE TSDRVRKAAA KIGYVYNRRA
AELRRQSSNA IGVVISDLRN PFFAEVLVGL ERRLAEAGYT VFMAHTNEDL ERQQRVLTIL
REQGIAGIAI CPALGTPISL PRSVKSWGVP LVVMVRTLGG GASYDFAGAD NSLGVRQAMD
HLIGKGHRRI AFLGGITGPV LQQRLDGYKE TFTAHRIRFH PDLIVTSQPT REGGHAAMVR
LLKARKSVKA AVCYNDLTAF GALSALGDAG LRAGVDFDLI GFDNILDTIH SNPPLSTVDI
KPEQMGAEAA VLLLARIKEP GLKVQRFIQE PTLVLRQSG
|
|---|
| |