Gene Veis_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3564 
Symbol 
ID4694433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3940526 
End bp3941191 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content65% 
IMG OID639851319 
ProductFis family transcriptional regulator 
Protein accessionYP_998300 
Protein GI121610493 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGG ATTTTTCTCC CATTGCCGAG AACTGGCGCT TTTTTGCGAC GGGCCTGGGC 
GTCACGGTCG TGCTCAGTGT GATCAGCGCG GTCAGCAGCA TCCTGGCCGG CCTGGTGATC
ACGCTGCTCA GGCTCTACGG CCCGCGGTGG CTGCGGCCGC TGCTGGTGTT CTACATCGAC
AGCATGCGCG CCATCCCGGT GCTGGTGGTG CTGGTGTGGA TTTACTTTGC TTTTCCGATT
CTCGTGGGCC TGAACTTTGC GCCGTTCTGG GCGGCGCTGG TGGCGCTGAC GCTGCATATC
GCCGCCTATG CCGCCGAGGT GATCCGCGCC GGCATCGAGT CCATCCGGCC GGGCCAGACC
CGGGCCGCAT TGGCGCTGGG CATGTCGCGC GCGCAGATCT TGCGCAAGGT GCTGCTGCCG
CAGGCCACGA TCCGCATGTT GCCGGCCTTT GGCTCGATCC TGACGATGGC GATCAAGGAC
ACGGCCATCG CCTCCGTGAT CGCGGTGCCG GAACTGATGC ACAAGGCGGA GACCGTGGCC
GGCCAGAGCT ACCGCCCGGT GGAGGTGTCC AGTGCCGTGA TGCTGGCGTA TTTCCTGATC
CTGTTTCCGG TCACCCGTGG CGTCGACCGG TTGTACCAGC GCCTGGCGCA TCTGGGCCGC
TCCTGA
 
Protein sequence
MDLDFSPIAE NWRFFATGLG VTVVLSVISA VSSILAGLVI TLLRLYGPRW LRPLLVFYID 
SMRAIPVLVV LVWIYFAFPI LVGLNFAPFW AALVALTLHI AAYAAEVIRA GIESIRPGQT
RAALALGMSR AQILRKVLLP QATIRMLPAF GSILTMAIKD TAIASVIAVP ELMHKAETVA
GQSYRPVEVS SAVMLAYFLI LFPVTRGVDR LYQRLAHLGR S