Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3564 |
Symbol | |
ID | 4694433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3940526 |
End bp | 3941191 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639851319 |
Product | Fis family transcriptional regulator |
Protein accession | YP_998300 |
Protein GI | 121610493 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGG ATTTTTCTCC CATTGCCGAG AACTGGCGCT TTTTTGCGAC GGGCCTGGGC GTCACGGTCG TGCTCAGTGT GATCAGCGCG GTCAGCAGCA TCCTGGCCGG CCTGGTGATC ACGCTGCTCA GGCTCTACGG CCCGCGGTGG CTGCGGCCGC TGCTGGTGTT CTACATCGAC AGCATGCGCG CCATCCCGGT GCTGGTGGTG CTGGTGTGGA TTTACTTTGC TTTTCCGATT CTCGTGGGCC TGAACTTTGC GCCGTTCTGG GCGGCGCTGG TGGCGCTGAC GCTGCATATC GCCGCCTATG CCGCCGAGGT GATCCGCGCC GGCATCGAGT CCATCCGGCC GGGCCAGACC CGGGCCGCAT TGGCGCTGGG CATGTCGCGC GCGCAGATCT TGCGCAAGGT GCTGCTGCCG CAGGCCACGA TCCGCATGTT GCCGGCCTTT GGCTCGATCC TGACGATGGC GATCAAGGAC ACGGCCATCG CCTCCGTGAT CGCGGTGCCG GAACTGATGC ACAAGGCGGA GACCGTGGCC GGCCAGAGCT ACCGCCCGGT GGAGGTGTCC AGTGCCGTGA TGCTGGCGTA TTTCCTGATC CTGTTTCCGG TCACCCGTGG CGTCGACCGG TTGTACCAGC GCCTGGCGCA TCTGGGCCGC TCCTGA
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Protein sequence | MDLDFSPIAE NWRFFATGLG VTVVLSVISA VSSILAGLVI TLLRLYGPRW LRPLLVFYID SMRAIPVLVV LVWIYFAFPI LVGLNFAPFW AALVALTLHI AAYAAEVIRA GIESIRPGQT RAALALGMSR AQILRKVLLP QATIRMLPAF GSILTMAIKD TAIASVIAVP ELMHKAETVA GQSYRPVEVS SAVMLAYFLI LFPVTRGVDR LYQRLAHLGR S
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