| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3556 |
|---|
| Symbol | |
|---|
| ID | 4692650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 3932900 |
|---|
| End bp | 3933652 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639851311 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_998292 |
|---|
| Protein GI | 121610485 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATTG ATTTCAAAAA TGAAACCGTT GCCGTGAGCG GCGCTGCCGT CGGTTTTGGC
CGATCGATTG CGCTGCGATT TGCGGCACTG GGGGCCAGCG TTTACGCTTG CGATATTCAC
GATGAAGCAA TGGCCGGGTT GCGCGCGCAT GGCGTCGTCA CTGACAGGGT GGATCTCTGC
CACCGCGAGG AGGCGCGCGA CTGGATAAAA ACCGTGGAAG CGCACGCCGC AGGCGTCTTG
TCAGTGCTGG TAAACAATGC CGGTGGCGTC GCCGGTCAGA CCAACAAGCC CATCGAAACC
GTTGCTGATC CGGATTGGGA TCGTGTCATT GCGATCAATC TGGGTGCCAC TTTTGCGTTG
AGCCAAGCGG CGGCGGCCGG CATGAAAAAC GCGCGGGCTG GTGCCATTGT CAATATCAGT
TCCGGGGCTG GATTGCGGGC CTCATTGACG GGAGTGCAAG CGTACTGCGC AGCCAAGCAC
GGTATATTGG GCCTGACGCG CCAATTGGCG CATGAACTGG GGCCTTTCGG GGTTCGAGTC
AACGCCGTGG CCCCCGGTTT CGCTCGTACC AACGACGCTT CGGAAGCCCA ATGGGTCGCA
ATGGGCGCAG AGGGCCAGGC GGCCTTGCTG AATCGAATTC ACCTTCGAAG GCTGGTCTGT
GCCGACGATA TTGCCGATGC AACCGTATTT CTTGCAAGCC GGTATTCCAG CATGATAACG
GGACAGATCT TGTCCGTTGA TGGCGGGTAC TGA
|
|---|
| Protein sequence | MQIDFKNETV AVSGAAVGFG RSIALRFAAL GASVYACDIH DEAMAGLRAH GVVTDRVDLC
HREEARDWIK TVEAHAAGVL SVLVNNAGGV AGQTNKPIET VADPDWDRVI AINLGATFAL
SQAAAAGMKN ARAGAIVNIS SGAGLRASLT GVQAYCAAKH GILGLTRQLA HELGPFGVRV
NAVAPGFART NDASEAQWVA MGAEGQAALL NRIHLRRLVC ADDIADATVF LASRYSSMIT
GQILSVDGGY
|
|---|
| |