| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3529 |
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| Symbol | |
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| ID | 4694815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 3898341 |
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| End bp | 3900563 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639851285 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_998266 |
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| Protein GI | 121610459 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.22216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTGCC TGCTTTCGCC CCGCCTCCAC TCAGCCATCA AAACGGTCGC TGTCAGTGCA
TTGTTTGCCT GCGCCAGCGG CCAGATGTCG GCCCAAACGG CGATCGACAC TGGCACCAGC
AGCGTGCGCG CCGGGGAACC CGTCACGCTG AACTTTGCCA ATGCCGACAT CGAGGCCGTG
GCACGCACCA TGGCCACCAT CACCGGCCGC AACGTGGTGG TCGACCCGCG CGTCAAGGGC
CAGCTCAACC TGGTCACCGA ACGCGCCGTC ACGCCCGCCG CCGCCTTCGA GCAGTTTCTG
GCGGCGCTGC GGCTACAGGG CTACACGCTG GTCGAGGCAG CGGGCCTGTA CAAAGTGGTG
CCCGAGGCCG ACGCCAAACA ACAAGGCGGC AGCGTCAGCG TGGCGCAGGG CAGCACCGGC
AGCACGCCCG GGGGCGGGCA GATCGTCACG CAGATCTTCA AACTCGACTT CGAGAACGCC
GCCAACCTGG TGCCGGTGCT GCGCCCGCTG ATCAGCCCGA ACAACACCAT CAACGTCAAC
CCCGGCAACA ACTCGCTGGT GATCACCGAC TACGCCGACA ACCTGCAGCG CCTGGCGCGC
ATCGTGGCAG CGATGGATGT CTCCAATGCC ACCGATGTGG AAGTAATTGC GCTGGAAAAC
GCCATTGCCA CCGACCTGGC ACCGCTGATC GTGCGCCTGA TCGATGGCGG CAACGCCGGC
ACACCGGCGG CCGCGCAGGG CCAGGCCGAC AACTCGTTCA AGACCACGCT GATCGCCGAG
CCGCGCAGCA ACGCGCTGAT TCTGCGCGCC GCCAACCCGG CCCGCGTGGC CTTGGTGCGC
TCCCTGGTCG AGCGGCTCGA TCGGGCCCCC GCGCCCGGCA GCAGCGCGGC CAGCGGCAAC
ATCCATGTGG TCTATCTGAA AAACGCCGAC GCCACCAAAC TGGCCGCCAC CTTGCGCGCC
GCAATCAGTG GCAACGGCAG CGGCATGGCG TCATCAGGGC CGGGGCCGTC CGGCAGCACG
ACGGGCAGCG GCGGCGGGCT GCTGTCAACG TCGACCGGTG GCAGCAGCCC GGGCCAGAGC
CTGAACGCGG CCAGCAGCAA TCAGCCCGCC ACTGGCGGCC AGATCCAGGC CGACCCGACG
ACCAACTCGC TGATCATCAC GGCCCCCGAC CCCCAATACC GCCAATTGCG CGCCGTCATC
GAGCAACTCG ACGGGCGCCG CGCGCAGGTG CTGGTGGAAA GCCTGATCGT TGAAATTTCG
GCCAACAAAC TGGCGCAGTT CGGCGTCCAG TGGCAAAGCC TGCTGGGCAA AAAGGGCGCC
AGCCTCCTCG GCGCCATCGG CACCAACTCC GGCCAATCTG GCGGCAACAT CACGAGCCTG
ACCGCCGCAC TGGCGTCCGG CAGCACCACC AGCATCGCCA CCGCTGCCAA TTCGCTCGGT
CAGGGCATGA ACCTGCTGCT GGCGCCGCGC ATCAACGGCC AGTATTACCT GGGCGCACTG
GCCAACTTTT TGCAAAACAG CGGCGATGCG AACGTGCTCT CCACGCCCAA TCTGATGACA
CTGGACAACG AGGAAGCCAA AATCGTCATC GGCAACAACG TGCCCTTCGT CACCGGCTCT
TATGCCAACA GCAGCAGCAA CAGCACGGTC AACCCGTTCA CCACGGTGCA GCGCCAGGAT
GTCGGGCTGA TGCTGCGCGT GCGCCCGCAA ATCAATGAAA ACGGCACCGT CAAGCTGTCG
GTCTACCAGG AAGTCTCCAA GATCGACGCC TCGACGCTGA CCTCCCCGAA TGGGCCAACC
ACCAGCAAAC GCTCCATCGA ATCGAATGTG CTGGTGGAAG ACGGCAGCAT CATCGTGATC
GGCGGACTGC TGGAAGACAG TTACTCACTC AATCAGGACA AGGTGCCGGT GCTGGGCGAC
ATGCCGGTCC TCGGCAACCT GTTCCGCAGC GAAAAGCGCA CCAGAAACAA AACCAACCTG
ATGATCTTCC TGCGCCCCAC CGTGTTGCGC AGCAGCGCGA GCTCCGACAT CCTGACCGCC
GACAGATACG ACGCCATCCG CGCGCTGCAA CTGGGCATCC AACCCGTCGC CCATCCGATG
CTCGATGCCG TCGATGCCGC CCCGGTGCTA CCCCCGCCGC GGCCTGGCAC CGGGCACGAT
GATTCACCGG CCGCGCCGGA AGCAATCCGG CCGGTCGACA CCGCCCCGGT CACTCAGTTT
TGA
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| Protein sequence | MTCLLSPRLH SAIKTVAVSA LFACASGQMS AQTAIDTGTS SVRAGEPVTL NFANADIEAV
ARTMATITGR NVVVDPRVKG QLNLVTERAV TPAAAFEQFL AALRLQGYTL VEAAGLYKVV
PEADAKQQGG SVSVAQGSTG STPGGGQIVT QIFKLDFENA ANLVPVLRPL ISPNNTINVN
PGNNSLVITD YADNLQRLAR IVAAMDVSNA TDVEVIALEN AIATDLAPLI VRLIDGGNAG
TPAAAQGQAD NSFKTTLIAE PRSNALILRA ANPARVALVR SLVERLDRAP APGSSAASGN
IHVVYLKNAD ATKLAATLRA AISGNGSGMA SSGPGPSGST TGSGGGLLST STGGSSPGQS
LNAASSNQPA TGGQIQADPT TNSLIITAPD PQYRQLRAVI EQLDGRRAQV LVESLIVEIS
ANKLAQFGVQ WQSLLGKKGA SLLGAIGTNS GQSGGNITSL TAALASGSTT SIATAANSLG
QGMNLLLAPR INGQYYLGAL ANFLQNSGDA NVLSTPNLMT LDNEEAKIVI GNNVPFVTGS
YANSSSNSTV NPFTTVQRQD VGLMLRVRPQ INENGTVKLS VYQEVSKIDA STLTSPNGPT
TSKRSIESNV LVEDGSIIVI GGLLEDSYSL NQDKVPVLGD MPVLGNLFRS EKRTRNKTNL
MIFLRPTVLR SSASSDILTA DRYDAIRALQ LGIQPVAHPM LDAVDAAPVL PPPRPGTGHD
DSPAAPEAIR PVDTAPVTQF
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