Gene Veis_3522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3522 
Symbol 
ID4694537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3892801 
End bp3893289 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content73% 
IMG OID639851278 
Productgeneral secretion pathway protein H 
Protein accessionYP_998259 
Protein GI121610452 
COG category 
COG ID 
TIGRFAM ID[TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0510608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.632823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCCC GCGGCCCTGG CAGCCATGCA CCCCCACGCT GGCGCGGCTT TACTTTGCTG 
GAACTGCTGA TCGTCATCTG CATCATGGCC CTGGCCACGG CCGGGGTGGG GCTGGCCTTG
CGCGACGACG GGCAGATGCT GCTCGAACGC GAGGCCGCCA GGCTGGCCGC GCTGCTCGAA
TCGGCCCGCG CGCAGTCGCG TGCCGCCGGG GTGCCGGTGC GCTGGCGCGT GCTGCCGCAG
GGCTTTCGGT CCGGGGGCCT GCGGCAGGAC TTCCGTTTCG AGGGCCTGCG CCCCAACGCG
CAGGCCGCGT TGCCCAGCCA GTGGCTCGAC GCCGGCACCG TGGTGCACGG GCAGACGGTG
CTGCAACTGG GCCCCGAGCC GCTGATTGGC CCGCAGCAGG TGCAAATCGG CCACCCCTCG
TACCCCGGGC GCAGCTTGCG CGTCGTCACC GATGGTGTGC GCCCTTTCGC CGTCGAGTCG
GTGCCGTGA
 
Protein sequence
MPARGPGSHA PPRWRGFTLL ELLIVICIMA LATAGVGLAL RDDGQMLLER EAARLAALLE 
SARAQSRAAG VPVRWRVLPQ GFRSGGLRQD FRFEGLRPNA QAALPSQWLD AGTVVHGQTV
LQLGPEPLIG PQQVQIGHPS YPGRSLRVVT DGVRPFAVES VP