Gene Veis_3508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3508 
Symbol 
ID4690887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3880325 
End bp3881353 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content65% 
IMG OID639851265 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_998246 
Protein GI121610439 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.276709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0987839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACT TCGATGCGCA ACGCCGGCAA ATGCTCGATG CGTCGCTGCT GGCCGGCGGA 
CTGGCAGCCA CAAGCGGTGT CATCCCGATC GATGCGTTTG CCGCAGACAA GGCGAACGTC
AGCCTGCAAC TGGGCTGGCT CATCGGTGGC AACCAGATCG GCGAGGTGGT GGCCAAGCGT
CTGGGTTACT ACGAACAGGA GGGCGTGAAC CTGACGATCC AGCCCGGCGG GCCGAACATC
GATGGCGTGG CGGTCGTCGC GTCCGGTCGC AACGAGGTGG GCCAGGTGTC GTCCAGCCCG
TCGATCATGC TGGCGACCTC CCAGGGGATT CCTGTCAAGT GCTTCGCCGT CGGCGCCCAG
CGCCACCCGT ACTGCTTTTT CTCGCTGCAG AAAAACCCGG TGCGCAAACC CGCCGACATG
GCAGGCAAGA GGGTCGGCAT CCAGGCCACC GGCATGGTGC TGCTGCGCGC CTTGCTGGTG
CAAAACAAGA TCGCCGAGAA GGATGTCGAC ATCATCCCGA TCGGCAGCGA CATGACGCCG
CTGATGAGCG GACAGGTCGA TGTCGTGACC GGCTGGCTCA CGAACACCAC CGCGCTGAAG
GTGCTGGGCA AGGAGCGCGT CGAATTGAGC CTGTGGGATT CCGGCGTGCA CCTGTATGCG
CTGCCGTACT ACGCGACGAC CAAGACGCTG CGGCGCCAGC CGCAGGTGCT CGCCGCGTTC
CTGCGCGCCA CCGCGCGCGG CTGGAGTTAT GCCAACGCGA ATCGCGATGC AGCGGTCGAT
CTGCTGATCA AGGAATACCC GAACCTGAAC CACGGCGATG AGCGGGTCGC GCTCGACGTG
ATGCTGCGCT ACAGCTTCAG CGAACTGACC AGGAGGCAGG GCTGGGGCGC AATGGACCCG
GACGGCTGGC AGGCGCAGAT TTCGCTGTAC GCACGGCTCG GCCAGTTCAG CGCCAAGACC
CCTGAACTCG ACGACGTGAT GACACTCGAC GTGCTGAAGG CGACAAGTGC CGCGCGGCTG
AGAGCCTGA
 
Protein sequence
MSNFDAQRRQ MLDASLLAGG LAATSGVIPI DAFAADKANV SLQLGWLIGG NQIGEVVAKR 
LGYYEQEGVN LTIQPGGPNI DGVAVVASGR NEVGQVSSSP SIMLATSQGI PVKCFAVGAQ
RHPYCFFSLQ KNPVRKPADM AGKRVGIQAT GMVLLRALLV QNKIAEKDVD IIPIGSDMTP
LMSGQVDVVT GWLTNTTALK VLGKERVELS LWDSGVHLYA LPYYATTKTL RRQPQVLAAF
LRATARGWSY ANANRDAAVD LLIKEYPNLN HGDERVALDV MLRYSFSELT RRQGWGAMDP
DGWQAQISLY ARLGQFSAKT PELDDVMTLD VLKATSAARL RA