Gene Veis_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3474 
Symbol 
ID4694066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3842465 
End bp3842890 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content62% 
IMG OID639851231 
ProductPilT domain-containing protein 
Protein accessionYP_998213 
Protein GI121610406 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.26779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCC TCGATACCAA CGTCATTTCC GAGTTGTGGA AGGTTAACCC GGATTCCAAC 
GTGCTGGCGT GGATCGATGC TCAGGCTATT GAAACGCTCT ATCTGTCTGC CGTTACGGTC
GCAGAGCTGC GCTATGGCCT TGCGACGATG CCCGAGGGCA AGCGCCGCAC GATCTACCAA
CAACGGCTAG AGGATGAGGT TTTGCCGAAC TTCGCCGGCC GCGTGCTGGC CTTCGACCTG
GACATGTCCA AGACCTATGC CGAGCTGATG GCGCGGGCCA GGGCAGGGGG CAAAGCCATC
GCCAAGGCAG ACGGCTACAT CGCGGCCACG GCCGCCGCGC ACGGCCTGAT AGTGGCGACA
CGCGACACCA GCCCATTTGA GGCCGGAGGG CTTCAGGTCA TCGACCCTTG GGAGGCTTTG
CCGTGA
 
Protein sequence
MIVLDTNVIS ELWKVNPDSN VLAWIDAQAI ETLYLSAVTV AELRYGLATM PEGKRRTIYQ 
QRLEDEVLPN FAGRVLAFDL DMSKTYAELM ARARAGGKAI AKADGYIAAT AAAHGLIVAT
RDTSPFEAGG LQVIDPWEAL P