Gene Veis_3449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3449 
Symbol 
ID4690456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3822800 
End bp3823621 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content67% 
IMG OID639851206 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_998188 
Protein GI121610381 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTGGC AGCACGCGCT GCGCATGATG CTGGTGTTGG CGCTGCTGGG CGTGGCCGCG 
TTCCCGCTGT ACTGGATGCT GGTCACCTCG CTGACCGCGT CGCCGAACCT GTTCGCGGCC
AGGCCGCAAC TGCTGCCGGA CTGGTCGCAA TGGCCGGTCT ACGGCCATGC GTTCAGCGCC
ACGGCCGTTG CCGTCTGGCT CAGGAACAGC GCCATCGTCG CCTTCGGCAC GGCGGCGCTG
AGCATCGCGC TGGCGCTCTT TCCGGCCTAT GTGCTGTCGC GCTACCGCAG CCGGGCGCTC
GCCATCCTGG GGGTCGCGCT GTTTGTCACG CAGATGCTGC CCGAGGCCAT GCTGGTGGTT
CCGTTGTACG CGATCTTCGG CCAACTGGGC CTGCTCGACA GCCTGACGGG CCTGATCCTG
GCCAATACGG CGTTCACGGT GCCGGTGATC ACGCTGATCC TCAAGGGGGC GGTTGACGGC
GTGCCGATCG ACATCGAGGA GGCTGCCGGC ATCGACGGCT GCTCGCGCCT GGGGCTGGTG
CTGACCGTGG TGCTGCCGCT GGTGGCGCCC ACCCTGGCGG CCGCTGCCGT GATCGCTTTC
TTCCACGGCT GGAACGAATA TGTGTTCGCC CAGACGCTGA TCAGCGACCA GGGCTTGCAG
ACCGCTTCGG TCGGCCTGGC CGGATTCGTC GGGGAACTGA GCACCCCCGT GCATACCGTG
ATGTCCGTCG GGCTGATGTA CACGCTGCCC GCCGTCATCT TCTACCTTTT CGTGCAGCGC
TATGTCGTCT CCGGCATGAC CGCCGGCAGC GTCAAGGGCT GA
 
Protein sequence
MSWQHALRMM LVLALLGVAA FPLYWMLVTS LTASPNLFAA RPQLLPDWSQ WPVYGHAFSA 
TAVAVWLRNS AIVAFGTAAL SIALALFPAY VLSRYRSRAL AILGVALFVT QMLPEAMLVV
PLYAIFGQLG LLDSLTGLIL ANTAFTVPVI TLILKGAVDG VPIDIEEAAG IDGCSRLGLV
LTVVLPLVAP TLAAAAVIAF FHGWNEYVFA QTLISDQGLQ TASVGLAGFV GELSTPVHTV
MSVGLMYTLP AVIFYLFVQR YVVSGMTAGS VKG