Gene Veis_3448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3448 
Symbol 
ID4693496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3821596 
End bp3822777 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content68% 
IMG OID639851205 
ProductABC transporter related 
Protein accessionYP_998187 
Protein GI121610380 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCA TCTCCCTGCG GGGCGTGAGC AAGAGCTTCG GTGGCAAGAA GGTCGCCGAT 
CAGATCACGT TCGATGTCGC CGACCGCGAA TTCCTGGTGC TGCTCGGGCC TTCGGGCTGC
GGCAAATCGA CCTTGCTGCG CATGCTGGCG GGTCTGGAGC AAGTCGGCAG CGGCGAAATC
CATGTCGGTG CGCGGCGCGT CGATACCTTG CCGCCCAGCG CGCGCGACAT GGCCTTCGTG
TTCCAGTCCT ATGCGCTGTA CCCGCATATG ACGGTGCGGC GCAACATCAC TTTCCCGCTG
ATCATGCGCG CGCACCGCTG GTGGTTCCAT CTGCCGCTGA TCGGCGGCCT GGCCAAGCGG
CGCATCGAGC AGACGCCGGC GGTGCGCGCC CTGGTCGAGC GCACGGCCAG GACGCTGGCA
CTGACCGACA TGCTCGATCA GTACCCGCGA ACGCTATCGG GCGGGCAGCG CCAGCGTGTG
GCGCTCGGGC GCGCGCTGGT GCGCCAGCCC GAGGTGTTCC TGATGGACGA GCCGCTGTCC
AACCTCGACG CCAAGCTGCG CAGTTCGATG CGCGCCGAGA TCATCAAACT GCACCGCGAA
GTGGGCAGCA CCTTCGTCTA TGTGACGCAT GACCAGATCG AAGCCATGAC CATGGGCACG
CGCATCGCGC TGATGCGCGA CGGCGTGGTG CAGCAGTTCG GCACGCCGCG CGACATCTAC
ACCGACCCGG CCAACAGCTT CGTGGCCCGC TTCATCGGCA CGCCGCCGAT GAACCTGATC
GAAGCGCGCA TCGTGCCGCA GCGCGGCCTG GCCATTGGCC CGGTGCTGCT GCCGCTGCCC
GGGCACCTGG CCGCATTGGA GCAGCCGACG GCGCGCGATG TCCTGCTCGG CATCCGCCCG
CATGCGCTGC GTCCGGGCCG GGGCAAAGAC CTGCTGGCCG GCCAGGTGGT GCTCGTCGAG
CATGCCGGGG CCGAGTCCAT CGTCAGCATC AGGCTCGACC ATGCCCACAC CGCCCACCAC
GAGGACGGCA CCAGTGCCGC CGAGGTCATG CTCGTGCTCC AGGGTTACAG CGACTTGTGC
GCCGGCCAGC CGGTGCAGTT GTCGCCCGAT CTGGGCGAAG CCGTCGTGTT CGATCGCGCC
GGCCAGCGCA TCCGCGTTCC GGCGCATGAC CGCCGGCATT GA
 
Protein sequence
MAAISLRGVS KSFGGKKVAD QITFDVADRE FLVLLGPSGC GKSTLLRMLA GLEQVGSGEI 
HVGARRVDTL PPSARDMAFV FQSYALYPHM TVRRNITFPL IMRAHRWWFH LPLIGGLAKR
RIEQTPAVRA LVERTARTLA LTDMLDQYPR TLSGGQRQRV ALGRALVRQP EVFLMDEPLS
NLDAKLRSSM RAEIIKLHRE VGSTFVYVTH DQIEAMTMGT RIALMRDGVV QQFGTPRDIY
TDPANSFVAR FIGTPPMNLI EARIVPQRGL AIGPVLLPLP GHLAALEQPT ARDVLLGIRP
HALRPGRGKD LLAGQVVLVE HAGAESIVSI RLDHAHTAHH EDGTSAAEVM LVLQGYSDLC
AGQPVQLSPD LGEAVVFDRA GQRIRVPAHD RRH