Gene Veis_3430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3430 
Symbol 
ID4694238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3801686 
End bp3802636 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content55% 
IMG OID639851187 
ProductABC transporter binding protein 
Protein accessionYP_998169 
Protein GI121610362 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0397056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCAC GCTTGACTGC TTTGCTTCTC GGCATTTTTA TATTCTCAGC CTGCTCGACC 
GTTGCCACGG CCCAATCCAA AACCAGGAAA ATTTACCTGA TGACCCATGG CAGTGACGCC
GATCCGATGT GGATAGAATG GAATCGTGGT GCCATCGCAG CCTGCGCAAA AATCCATGCC
AAGTGCCATA TCTCATTCCA CTCGAACAAT GTCTCGTCCC AAAAGGAGGC CTTCAATTCA
GCGATTGCCG CAAGAGCGGA TGGCATAGCA ACGACCAGCG CCGAGCCAAA AATCTGGAAC
AAGGAAGTCG CTGCGGCCAC CAAAGCCGGC ATTCCTGTGG TGTTCTTCAA TTCCGATGAC
CCTGCCGCAG GCCGTTACTC CTATGTCGGG GCAGACCTCT TTCAGGCCGG TGTGATCTGG
GCAAAATACC TCGTCGACAA CAAAGTCGTG AAAGCGGGAG ACAAGGTTTT CCTGCCGGTC
GAAGCCGCCG GGGCGACCTA CCAGGTGCTG GAAACCAAGG GGGTGGCCAG CGTGTTTGAC
CCATTGGGCA TCAAATACAG CGTGCTCGAA GTAGGCTCTG AACCCGCCAG CCTGATCACG
CGGATGACCG AATACCTGAC CGCAAACCGT GATGTCAAAG CCATCATCGG GCTTGGCGAT
CTGGTGACTG CCCACTCACG GGCAGCACTG AAAAACATTG GCGCCAAGCC CGGACAGATT
CCGGTGGTGG GCTGGGGCTA TAGCAAAGAT ACCGCAGAGG CTGTCATGGA AGGATATGCC
ATGGCCGGTC TGTGGCAATT CCCCTACGAC CTGGGCTACC TGCCCGTCAT GATCGTGGAT
GGTCTTGCCA AGGCAGGCGG CAAAGGATAT GACATCACCA CGCTGGACCT GTACGACAAA
TCGAATGTCC AGACCTTCCT CAAAACCATG ATGGCAGCGC AGAAAAAATA A
 
Protein sequence
MISRLTALLL GIFIFSACST VATAQSKTRK IYLMTHGSDA DPMWIEWNRG AIAACAKIHA 
KCHISFHSNN VSSQKEAFNS AIAARADGIA TTSAEPKIWN KEVAAATKAG IPVVFFNSDD
PAAGRYSYVG ADLFQAGVIW AKYLVDNKVV KAGDKVFLPV EAAGATYQVL ETKGVASVFD
PLGIKYSVLE VGSEPASLIT RMTEYLTANR DVKAIIGLGD LVTAHSRAAL KNIGAKPGQI
PVVGWGYSKD TAEAVMEGYA MAGLWQFPYD LGYLPVMIVD GLAKAGGKGY DITTLDLYDK
SNVQTFLKTM MAAQKK