| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3428 |
|---|
| Symbol | |
|---|
| ID | 4694010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 3800404 |
|---|
| End bp | 3801402 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639851185 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_998167 |
|---|
| Protein GI | 121610360 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.780713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAG ACAAGACCAC GGCGGCCGAC GGCAGCGCGT TGCGCCGCCT GTGCCGCCTG
CGCCACCACC TGCTCGCGCG CCGGCTGATG CAGGCTTTGC CGGTGCTGCT GTTTGCCACC
TTCGTCGTCT TCGGCTTGCT CAAACTCGTG CCGGGCGACA TCGCCGTGGC GCTGGCCGGG
GACAACGCCA GCGACGCGCG CCTGGCCGAG ATCCGGGCGC TCTACGGGCT GGACCAGCCC
TTTCTGGTGC AATACGGCCA CTGGCTGTGG CAGGCGCTGC AGGGCGACCT GTCCCAGTCG
CTGATGTCCG GCGAAGCGGT GACCGTGTCG ATCGCGCGCT GCCTGCCGAA AACCGCGCTG
ATCGTCGGCC TGGCACTGCT GATCGCGCTG GCGGTCGGCA TCCCGCTGGG CATGTGGGCC
GCCGCAAAGT GCGGCACCTG GGTCGATGGC TGGGTGATGA CGCTGGCCTC GCTCGGTGTC
GCCGTGCCGA ACTTCTGGCT CGCGATGGTG CTGATCGCCT GGTTCGCCTT GCAACTGAAC
TGGCTGCCGG CGACAGGCTC GGCCTCGCTC GGCGCCGAGC CTGTCGAGGC GCTGCGCCAT
GCCTTGCTGC CGGCGCTGGC GCTGGCCGCC GGCGGCATCG CCGAGGTGTC GCGGCAACTG
CGCAGTTCGC TGGTCGACCT GCTGTCGTCG CAGCAGGTGC GCACGCTGCA CGCCAAGGGC
CTGTCGCCTG CGGCCATCCT TTGCAAGCAT GGCCTGAAGA ATGTCGGCGT GAACTTGCTG
ACGGTGGTCA CCCTGCTGGC CAACCGGATG CTGGCCGCCA CGGTGGTGAT CGAGGCGGTG
TTCGCGATCC CGGGCATGGG CGGGCTGATC GTGCAGGGCG CGCTGTCGCG CGACTTCCCC
GTGGTGCAGG GCGTGGTGTT CACGATGGTG CTGATCGTGA TCACGATCAA CCTGGGTGCC
GATTTGCTAT ATGGCGTGAT CGATCCGAGG GTCAAGTAA
|
|---|
| Protein sequence | MSADKTTAAD GSALRRLCRL RHHLLARRLM QALPVLLFAT FVVFGLLKLV PGDIAVALAG
DNASDARLAE IRALYGLDQP FLVQYGHWLW QALQGDLSQS LMSGEAVTVS IARCLPKTAL
IVGLALLIAL AVGIPLGMWA AAKCGTWVDG WVMTLASLGV AVPNFWLAMV LIAWFALQLN
WLPATGSASL GAEPVEALRH ALLPALALAA GGIAEVSRQL RSSLVDLLSS QQVRTLHAKG
LSPAAILCKH GLKNVGVNLL TVVTLLANRM LAATVVIEAV FAIPGMGGLI VQGALSRDFP
VVQGVVFTMV LIVITINLGA DLLYGVIDPR VK
|
|---|
| |