Gene Veis_3425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3425 
Symbol 
ID4693501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3796693 
End bp3797703 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content71% 
IMG OID639851182 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_998164 
Protein GI121610357 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.358042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGA ACCAGCCTTT GCTGTCGTTG CGCGACGTGA CGGTTGCGTT CCACACCGCG 
CACGGTGAAC TGCCGGTGAC GCGCAAGGTC GCGTTCGACA TCGCCCGTGG CGAGCGCGTC
GGCCTGGTCG GCGAAAGCGG CTGCGGCAAG ACCGTGACCG GCCTGGCGGT CATGCGTTTG
CTGCCGCCGC AGGTGGCGCG TATCGCTGGC CGCATCGACT TCGGGGGCCG GGATCTGGCG
CAACTGCCCG AGCGCGAGAT GCGCGCAGTG CGCGGCCGCG ACATCGCGAT GATTTTCCAG
GAGCCGATGA GCGCACTCGA TCCGGTGTTC ACCGTCGGCA CCCAGATCAG CGAAGCCTGG
CTCGCGCACC ACCCCGGGCA CCCGGCGCAG GCCAGGCTGC GCGCGATCGA GGCGCTGGCG
CAGGTCGGCA TTGCGCAGCC GGCGCGCCGC TACGGCGAAT ACCCGCACCA TCTGTCGGGC
GGCATGCGCC AGCGCGTGAT GATTGCCATG GCCATCATCT GTGCGCCCCG GCTGTTGATC
GCCGACGAAC CCACCACCGC GCTCGACGTG ACGGTGCAGG CGCAGATCAT CACCTTGCTG
CGCGACCTGA GCGAGCGCAC CGGCATGGCG CTGCTCTTCA TCACGCACGA CCTGGGCGTG
GTGGCCGAGA CCTGCACCCG GATGTTGACG ATGTACGCCG GCGAAGTGGT CGAAGATGCC
GCAACCGACG CGGCGCTGAT GCGCCCGCGC CACCCTTACA CATCCGGCTT GCTGCGCTCG
CTGCCCCGGC TGACGCCATG GCGCGCCAGA CTCGGCTCCA TTCCCGGGCG TGTGCCGGCG
CCGGGCGCCA TGCCTGCCGG CTGCCGTTAC CGCGCACGCT GCACCTTCGC CGCGCCGGCC
TGCAGCGCCG AGCAGGGCCT GCTGCAAATC GGCGGCGCAC CCGTCGCACC GCACTGGGCG
CGCTGCGTGC GCGCGCAAGA GCTCGAACTC GCAGGCGCCG TCAGTCCATG A
 
Protein sequence
MALNQPLLSL RDVTVAFHTA HGELPVTRKV AFDIARGERV GLVGESGCGK TVTGLAVMRL 
LPPQVARIAG RIDFGGRDLA QLPEREMRAV RGRDIAMIFQ EPMSALDPVF TVGTQISEAW
LAHHPGHPAQ ARLRAIEALA QVGIAQPARR YGEYPHHLSG GMRQRVMIAM AIICAPRLLI
ADEPTTALDV TVQAQIITLL RDLSERTGMA LLFITHDLGV VAETCTRMLT MYAGEVVEDA
ATDAALMRPR HPYTSGLLRS LPRLTPWRAR LGSIPGRVPA PGAMPAGCRY RARCTFAAPA
CSAEQGLLQI GGAPVAPHWA RCVRAQELEL AGAVSP