Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3410 |
Symbol | |
ID | 4693838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 3781905 |
End bp | 3782633 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639851167 |
Product | integral membrane protein |
Protein accession | YP_998149 |
Protein GI | 121610342 |
COG category | [S] Function unknown |
COG ID | [COG5473] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.16233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCGATC CCTTGCGCTG GCTGCTCAAG GGTCTGCAGG ATATGCGCGC CGCCCCCGGC ATTGCCTCGT TCTACGGCAT GTGTTTTTGG GGCATGGCGC TGGTGCTGGG CTGGGTGTTC CGCACCCGGG CGGAGTATGT GATGTCGCTG GTCAGCGGCT GCCTGCTGCT CGGCCCGTTT CTGGCGATGG GGCTGTACGA CACCAGCCGC CGCCTCGAGG CGGGGCTTGC GCCCGGACTG GGCGAGTCGC TCACCTGCTG GGACAGTCGC CTGGGCAGCA TGGGCATGCT GGTGTTGTTG CTGGTGGTGC TGGAGCTGTT GTGGGGCCGA GCCTCGCTGG TGGTGTTCGC GGTGTTCTTC GACACCGGCA TGCCGTCGAC CAGCGGTGTG CTGCAAGCGC TGTTCAGCCC GCAAAACTGG GGGTTCGTCG CGGTGTACAC CGCAGTCGGC GGGGTGTTTG CCGGGCTGGT GTTTGCCAGT TGCGTGGTGT CGATCCCGAT GATTCTCGAC CGCGACACCG ATGCGCTCAC CGCCGGCATT ACCAGCCTGC GGGTGGTGCT CGACAACCAG GCCGTGATGC TGCTCTGGGG GGCGCTGATC ACGGCCATCG TCGCGCTGTC GCTCTGGTTC TGGGGCGCAG GGCTGCTGCT GGCAGGGCCG GTGCTGGGCC ATGCCAGTTG GCACGCTTAC CGCGCAGCCG TCTCTCCCAC CCGGTCCGCT GCCGCATGA
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Protein sequence | MADPLRWLLK GLQDMRAAPG IASFYGMCFW GMALVLGWVF RTRAEYVMSL VSGCLLLGPF LAMGLYDTSR RLEAGLAPGL GESLTCWDSR LGSMGMLVLL LVVLELLWGR ASLVVFAVFF DTGMPSTSGV LQALFSPQNW GFVAVYTAVG GVFAGLVFAS CVVSIPMILD RDTDALTAGI TSLRVVLDNQ AVMLLWGALI TAIVALSLWF WGAGLLLAGP VLGHASWHAY RAAVSPTRSA AA
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