Gene Veis_3379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3379 
Symbol 
ID4694886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3750467 
End bp3751303 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content53% 
IMG OID639851137 
Productextracellular solute-binding protein 
Protein accessionYP_998119 
Protein GI121610312 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0252504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.274195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA AGGCAATCTG CCAGTGCTTG GTAGCCGTTC TGACGCTGTT GGGCATGTGT 
TTTACTTCGC TGGCACATGC GGACAAGCTG GCAGACGTAT TGAAACGCGG TTATTTGATT
GTGGGTACCA CAGGTTCCAG TCCACCTTTT GGCTTCAAGG ATGAGAAAGG CGAACTGCAG
GGCTTCGATG TCGATATGAG CCGCCTGATC GCGAAAGCAC TGTTTGGTGA CCCGCAGAAG
GTGAAATTTG TCCTGTTGGG CAACGAGGCA CGCTGGACCG CGCTGCAGAC TGATCAGGTT
GACATGGTGG CACAATTTGC CACCATCACG CCTGAACGCT TGGTGCGTGT GGGCTTCACG
CCCCGTTACT TTGACACGGG AATGACAGTG GTGGTTCGCA AGGATTCGAA GATCAAGTCG
TTTGCCGACC TTGATAGTGC GGACGTGACC ATCGCGACCC TGACTGTCCC TGAGCAGATC
GATCTGGTCA AGCGCATGGC ACCGAACGCC CGCGTTGCAA GTTTCGCAAC AGTCGATCAG
CAATTCCTGG CATTGCGTTC GGGACGTGTA CAGGCGTTTC TCGTTGATCT ACCCATTGGC
ATGTGGTACG GAGCGACCAG TCCTGATGCA AGGGTCATTC CAGGTGTGTA CGATGGATTT
CAAAACTACG GAATTGCTTA TAAACTGGGC GAACTGAGCT GGAAGCAGTT CTTGGACGGA
TTTGTAACCG ATCTCACCAC CGGCTATTCC TACGTCCAAT ACACGGTGCT CTACAGGAAG
TATTTCAAGA TCAATCCTCC CCCACAGCGG GACTACAAGG TCATGGGTGC GATGTGA
 
Protein sequence
MKFKAICQCL VAVLTLLGMC FTSLAHADKL ADVLKRGYLI VGTTGSSPPF GFKDEKGELQ 
GFDVDMSRLI AKALFGDPQK VKFVLLGNEA RWTALQTDQV DMVAQFATIT PERLVRVGFT
PRYFDTGMTV VVRKDSKIKS FADLDSADVT IATLTVPEQI DLVKRMAPNA RVASFATVDQ
QFLALRSGRV QAFLVDLPIG MWYGATSPDA RVIPGVYDGF QNYGIAYKLG ELSWKQFLDG
FVTDLTTGYS YVQYTVLYRK YFKINPPPQR DYKVMGAM