Gene Veis_3376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3376 
Symbol 
ID4694079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand+ 
Start bp3748303 
End bp3748947 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content68% 
IMG OID639851135 
Product17 kDa surface antigen 
Protein accessionYP_998117 
Protein GI121610310 
COG category[S] Function unknown 
COG ID[COG3134] Predicted outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones7 
Fosmid unclonability p-value0.160787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA CCCTTATCTT TTCCGCCGTC GCCATCATCG CCGGCACCGC CGGCGCACAG 
GAACAAGGCC GCGTGCTGTC GGCCACGCCG ATCGTGCAAC AGGTGGGCAC CCCGCGGCAG 
GTGTGCGGCA ACGAAACCGT GTACAGCGGC AACCGCACCA GTGGCGCCGG GGCCGTGATG 
GGCGCAATCG CCGGCGGTGC CGCCGGCAAC GCCGTTGGCA AAGGCACCGG TCGTGCCGCC 
GCAACCGCCA TCGGTGTGCT GGGCGGAGCA ATACTCGGCA ACCAGATCGA AGGCGGTCAA 
CCCCAGTACC AGAACGTGCA GCGCTGCACG ACCGAGACCT ACTACGAGAA CCGCACCGTC 
GGCTACGACG TGGTCTACGA ATACGCCGGG CGCCAGTACA GCACGCGCAC GCAAAACGAC 
CCGGGCCACT GGATCAGCCT GAGCGTGCAG CCGACGGGCC AGACCTACTC CGCGCCGCCG 
CCGGTCATCT ACAGCCAGCC TGGCGTGGTG ACCTCGACCT GGTCCGTAGC GCCGGTCTAC 
CCGCCGCCGC CCATCCATCT GACTCCGCCG GTCACGGTGA TCGAATATGG CTACGACAGC 
GGGCGCCCCG ACTACCCGCA CCACCGCAAC CCCTACTGGC GCTGA
 
Protein sequence
MKKTLIFSAV AIIAGTAGAQ EQGRVLSATP IVQQVGTPRQ VCGNETVYSG NRTSGAGAVM 
GAIAGGAAGN AVGKGTGRAA ATAIGVLGGA ILGNQIEGGQ PQYQNVQRCT TETYYENRTV 
GYDVVYEYAG RQYSTRTQND PGHWISLSVQ PTGQTYSAPP PVIYSQPGVV TSTWSVAPVY 
PPPPIHLTPP VTVIEYGYDS GRPDYPHHRN PYWR