| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3308 |
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| Symbol | |
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| ID | 4694434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 3690955 |
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| End bp | 3692106 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639851071 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_998056 |
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| Protein GI | 121610249 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.033715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTACTA CGACATCCCT GCCTCGCATG AATCTGCTTT GCGCGGGTAT GGCATGCCTG
TCCATTACCT TGTCCGCATC GGTTGTACGC GCTGGCGAAG GGGTGCTCGA CATCGTCGCC
TGGCCAGGCT ACCTCGAACG GGGCGAGACG GATGCCAAAT ACAACTGGGT GACCAGTTTC
GAGAAAGAAA CCGGTTGCAA GGTGAACGTG AAAACAGCGG CGACTTCCGA TGAAATGGTC
TCTTTGATGT CCCAAGGGGT CTATGACCTG GTGACGGCAT CGGGCGATGC TTCATTGCGT
TTGGTTGCGG GAAAACGTGT GCAGGCCATT GATATCGCCA AAATACCGGC CTTTGCCAAA
CTGGACCCCC GCTTTACGGG CAAGCCATGG TACGTCGTCG ATGGCAAGGT CTATGGCGTT
CCCTATCAAT GGGGCCCGAA TGTGTTGATG TACAACACGC AGGTTTTCAA GCGCCCGCCA
ACATCCTGGG CGGTCGTGTT CGAAGAGCAA AATCTCGATG ATGGCAAATC GAACAAAGGT
CGCATACAGG CTTACGATGG TGCGATCTAC ATCGCTGATG CGGCGCTGTT CTTGAAGGCC
ACCCGCCCCG ACCTGGGCAT CGAGGATCCC TATGAGCTCA ATGCCAAGCA ATATGCCGAG
GTGCTCGATG TTTTGCGCCG TCAACGCCCG CTGATCCATC GCTACTGGCA CGACTACAAT
GTGCAAATGT CCGACTTCAA GTCTGAAGGG GTGGTCGCTT CCGGGTCGTG GCCAGTGCAG
GTCAATTTAC TGCAAAGTGA AAAGAAACCC ATCGCATCGG TCATTCCCAA AGAAGGTGTG
ACCGGATGGG CAGACACCAC CATGATGCAT TCGCAGGCCA AACATCCGCA ATGCGCTTAT
GCCTGGATGA ACTGGTCGCT CGACGACAAA GTGCAAGCAC ATGTTGCCGA GTGGTTTGGC
TCCAACCCGG TGACCGTTTC TGCTTGTTCG GCGACGCCCC CTGGCGGTAG CAAACCGTGC
ACGACCAACG GATTCGACCA ATTCGAGAAA ATCAGTTTCT GGAAAACACC ACAAGCCAAA
TGCAAGCAGG GAAACTGCAT ACCCTACAGC AAATGGACTA CCGATTACAT CTCCATCATG
GGTGGTCGCT GA
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| Protein sequence | MLTTTSLPRM NLLCAGMACL SITLSASVVR AGEGVLDIVA WPGYLERGET DAKYNWVTSF
EKETGCKVNV KTAATSDEMV SLMSQGVYDL VTASGDASLR LVAGKRVQAI DIAKIPAFAK
LDPRFTGKPW YVVDGKVYGV PYQWGPNVLM YNTQVFKRPP TSWAVVFEEQ NLDDGKSNKG
RIQAYDGAIY IADAALFLKA TRPDLGIEDP YELNAKQYAE VLDVLRRQRP LIHRYWHDYN
VQMSDFKSEG VVASGSWPVQ VNLLQSEKKP IASVIPKEGV TGWADTTMMH SQAKHPQCAY
AWMNWSLDDK VQAHVAEWFG SNPVTVSACS ATPPGGSKPC TTNGFDQFEK ISFWKTPQAK
CKQGNCIPYS KWTTDYISIM GGR
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