| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3292 |
|---|
| Symbol | |
|---|
| ID | 4690892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 3672884 |
|---|
| End bp | 3675004 |
|---|
| Gene Length | 2121 bp |
|---|
| Protein Length | 706 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639851055 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_998040 |
|---|
| Protein GI | 121610233 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components
[COG3386] Gluconolactonase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0638637 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.743935 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCTCCG AAAGCAATTG GGTCGCGCTC AGGTATCGGC TGGTCCCCGA TCATCTGATC
GGCGAGATTC TGTCCAAGAA ATGGATAGAC AACGCCATCG CCCTGCTGGT CATGGTCTGC
GTCGTCGTGG TCTTCGGCCA GCTGATTCCC GAGTTCTTTA CGGCCGGCAA CCTGCAGACG
ACATCGCGGC AGTTCGGTGA ATTCGCGCTG GTGTGCCTGG CGATGATGAT CGTCGTCATC
GTCGGCGGCA TCGACCTGAG CGTGGGCTCG AACTTTGCGC TCGGCAACTT CCTGACGCTG
GCATTGCTGA ACCTGGCCAA TCTGCCGCTG CCGGCGGTCA TTCCGATCGT GATGCTGGTC
TGCGCTGCGG TGGGCCTGGT CAACGGCGTG CTGATCGGTT ACTTGCGCCT GCGCGCATTC
CTGACGACCT TGGTCACCCT GATCATCGTG CGCGCGATCG TCGACATGCT GCTGCTGCGC
TATGCGCAAG ACATGTCGGT CGGGTTCTTT GAATCGGACC TGTGGGATCT GATGGGCTTG
GGGCATATCG CCGGACTGCC TTTCAGCTTC GTGGTGCTGG CGGCGGTCGC CGTGGTCGGC
CATATTGCGC TGACGCGCAG CCGGCCCGGC TGGCGGGCAA TGGCCATCGG TGGCTCGCGC
CGTTCTGCGC ACAACATCGG CTTGCCGGTG CGCGCAACGG TGTGCGGGGC CTATGTGATC
TCCGGCATGC TGTGCGGGAT GGGCGGCATC CTCTATGCGG CCAGGCTCAG CGGCGCAGGC
ACCGACACCG GCATGGGGCT GGAGATATCG GCCCTGACCG CCGTGGTGCT GGGCGGCAAC
AGCCTGGGCG GAGGGCGCGG CTCCGTGGTC AAGGCGCTGA TCGGCGCGGT CACGGTGCTG
ATTTTGACCA ACGGGGTGCT GCGCATCGGC CTGAACAGCG GTTCCGGCCC GATGGTTCTG
GGCTTGACCT TGCTCTTTGC CGTGTTCATC GATGTCAGAT GGCTCAAGCA CCGCGACAAG
CTGCTGTCCA AGCTCTACGT CTCGCCGACC TATATTGCGC TCCGACCGCC GCGCCCGATT
GCTGCCGGTT CCGGCTCGCC GCTGGCTTTG AACGATCGCC TGTCGGGTGT GCAAACCATC
GGCCTGGGCG TTGTCGAGTC GCCCGAGGAT GTGATCCTCG ACGATGACGA CTTCCTGTAC
TGCGGCACGC GCCACGGCGA CATCGTGCGT TTTACGCCCC CCGGCTACCA GCACTCGGAG
GTCTTCGCCC ATATCGGCGG AACGCCGCTG GGGATGACGT TCGACAAGGA GCGCAACCTG
CTCGTCTGTG TCGGCGGCAT GGGCCTGTAC CGGATCGGGG TCGATCGCAA GCTGTCCAAG
CTCACGGACG AGACCAACCG GTCTGCGTTC TCCGTGATCG ACGATTCGCG GCTGCGCTTG
GCCGATGACC TGGACATTGC GCCCGACGGG CGGGTCTTCT TCAGCGAGGC AACGATCCGC
TACGAGATGC ACGACTGGCC CGTGGATGCG CTGGAAAGCC GCGGCAACGG ACGGATCATC
TGCTACGACC CGCGCTCCGG CAAAACGCAG ACCGTGGTGC GCAACCTGGT GTTTCCGAAC
GGCGTGTGCC TGGCGCACGA TGGGCAGTCC ATGCTTTTCG CCGAGAGTTG GGCCTGCACG
ATCAGCCGGT ACTGGATCAG CGGCCCGAAG GCCGGCCGCA CGGAATGTCT GATCGACAGG
CTGCCGGGCT ACCCGGACAA CATCAACCGT GCCTCTGACG GTACCTACTG GGTCGCGCTG
ATGGGGATGC GCTCGCCCGC GCTGGATGTC GCGTTGCGCA TGCCGGGCTT CAGGCGCCGG
ATGGCCAGGC GCATCGCGCC GGACCAGTGG CTGTATCCGA ACCTGAACAT CGGCTGCGTC
GCGCGCTTCG ACGACCAGGG GAACATCCTG GAGTCGATGT GGGATCAGGG AGCGAAGAAC
CATCCGATGA TCACCTCGAT GCGCGAGCAC AAGGGCTGGC TGTATCTGGG CGGGATCACG
AACAACCGGA TCGGGCGGGT GCGCCTGGAG CGGGCAGACC CAGGCTGGAG CAGCTATCAG
AGCTACTGGG GCAGGCAATG A
|
|---|
| Protein sequence | MASESNWVAL RYRLVPDHLI GEILSKKWID NAIALLVMVC VVVVFGQLIP EFFTAGNLQT
TSRQFGEFAL VCLAMMIVVI VGGIDLSVGS NFALGNFLTL ALLNLANLPL PAVIPIVMLV
CAAVGLVNGV LIGYLRLRAF LTTLVTLIIV RAIVDMLLLR YAQDMSVGFF ESDLWDLMGL
GHIAGLPFSF VVLAAVAVVG HIALTRSRPG WRAMAIGGSR RSAHNIGLPV RATVCGAYVI
SGMLCGMGGI LYAARLSGAG TDTGMGLEIS ALTAVVLGGN SLGGGRGSVV KALIGAVTVL
ILTNGVLRIG LNSGSGPMVL GLTLLFAVFI DVRWLKHRDK LLSKLYVSPT YIALRPPRPI
AAGSGSPLAL NDRLSGVQTI GLGVVESPED VILDDDDFLY CGTRHGDIVR FTPPGYQHSE
VFAHIGGTPL GMTFDKERNL LVCVGGMGLY RIGVDRKLSK LTDETNRSAF SVIDDSRLRL
ADDLDIAPDG RVFFSEATIR YEMHDWPVDA LESRGNGRII CYDPRSGKTQ TVVRNLVFPN
GVCLAHDGQS MLFAESWACT ISRYWISGPK AGRTECLIDR LPGYPDNINR ASDGTYWVAL
MGMRSPALDV ALRMPGFRRR MARRIAPDQW LYPNLNIGCV ARFDDQGNIL ESMWDQGAKN
HPMITSMREH KGWLYLGGIT NNRIGRVRLE RADPGWSSYQ SYWGRQ
|
|---|
| |