| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3288 |
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| Symbol | |
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| ID | 4693892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 3668810 |
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| End bp | 3669571 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639851051 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_998036 |
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| Protein GI | 121610229 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.923163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGACT CTGCGGCCTC TTCTTTCGTG GATCTGCGCG ACCTGCGCCT GGATGCGGCC
CATGCGCTGC TGGCCCAGGC AGGCGGCTAC CAGACCGCCT GGCAGGGCGC AACGGCGCCT
GCGCGTTACT TGCAGGGCCT GATCGACGGC CTGTGCGAAC TGTCCCTTCT GGACCCCCTG
ACGGGCCTGG CCAGCCGCAG GCAGTTGCAG GCAGTGCAAG AGCGCGAGAT CGACCGCGTG
ACCCGCTCGG GCGAGACCGC CTTGCTGCTG ATGCTCGCCA TCGACCATTC CAAGCCACTG
AGCGACAGGC CCGAGCACCG GGCCGGCGCC ATGGTGCTGC AATCGGTGGC CCGCACACTC
AGCGCCTGCC TGCGCCCCAT GGACACCCTG GCGTGCTGTG GCGACGCCGC CTTCGCCGTG
GTTCTGCCCG CTTGCCATGC CGGGTTCGGC CAGGTGGTGG CCGAGCGCAT CCGGCGCGTC
GTGGCGAACG CGCCGATCCA GCTCTCGGCC GCAGTGGCGC TGGATGTCAC GGTGAGCATC
GGCGGCGCGT TTGCGCTGCC GGGGCTGCGC TCGACGGCAC GGCTGTGGAG CGACCGGGCC
GAGCAGCAAC TCGCCCAGGC CCGATCGGCA GGCTGCAACC GCATCAGCAT CGAGGCGCAG
GCCGACAGCA CCGTCAGCGC CGAAGAAAAA AGCCTGTTGT TTGGCCCGCG CCGCCCTCCG
CCCTCGGGCT GCTCGCTGGA CCCGGCCGAC AATGCCTATT GA
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| Protein sequence | MSDSAASSFV DLRDLRLDAA HALLAQAGGY QTAWQGATAP ARYLQGLIDG LCELSLLDPL
TGLASRRQLQ AVQEREIDRV TRSGETALLL MLAIDHSKPL SDRPEHRAGA MVLQSVARTL
SACLRPMDTL ACCGDAAFAV VLPACHAGFG QVVAERIRRV VANAPIQLSA AVALDVTVSI
GGAFALPGLR STARLWSDRA EQQLAQARSA GCNRISIEAQ ADSTVSAEEK SLLFGPRRPP
PSGCSLDPAD NAY
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