| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3283 |
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| Symbol | |
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| ID | 4694154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 3661499 |
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| End bp | 3663394 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639851046 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_998031 |
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| Protein GI | 121610224 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCA CATCCTTTCC CCTGCTGGAA ACCATCGACG ACCCGGCGCA ACTGCGCCAG
CTCGCGCGCG CGCAGCTCAA GGTGCTGGCT GCGGAGCTGC GCGGCTTCGT GCTGGAGAGC
GTCTCGCGCA CCGGCGGCCA CCTGAGCTCC AACCTGGGCA CGGTGGAACT GACGGTGGCG
CTGCACCATG TATTCCAGAC GCCGCATGAC CGCCTGGTAT GGGACGTGGG CCACCAGACC
TATGCGCACA AGATACTGAC CGGCCGGCGT GAGCGCATGC ACACGCTGCG CCAGCAAGGC
GGCATCTCGG GCTTTCCGCA GCGCGGCGAG AGCGTGTACG ACACCTTCGG CACGGCGCAT
TCGAGCACCA GCATCTCGGC CGCGCTGGGC ATGGCGCTGG CGGCCAAGCG CAAGGGCGAG
AGCCGCCACA CCGTGGCCAT CATCGGCGAC GGCGCGATGA GCGCCGGCAT GGCCTTCGAG
GCGCTGAACA ACGCCGGCGT GGCCGACTGC AACCTGCTGG TGGTGCTCAA CGACAACGAC
ATGAGCATCA GCCCCCCGGT GGGCGCGCTC AACCGCTACC TGGCCCAGCT CATGAGCGGG
CGGTTCTACG CAGCGGCCAA GAACATGGGC AAGACCGTGC TGCGGCCCAT GCCCCCGTTG
CTGGAATTTG CCAAGCGCTT CGAGCAACAG GCCAAGGGCC TGGTCGTGCC CGCCACATTG
TTCGAGAAAT TCGGCTTCAA CTACATCGGG CCGATCGACG GGCATGACCT CGATTCACTG
ATCCCCACGC TGGACAACAT CAAGGGCCTC CAAGGCCCGC AATTCCTGCA TGTGGTGACC
AAAAAAGGCC AGGGCTACAA GCTCGCCGAG GCCGACCCGG TGGCCTACCA CGGCCCGGCC
CGGTTCGACC CCGCCGTGGG CCTGGTCAAA AGCAGCACCG CGCCCCGGCT GACCTTCACC
CAGGTGTTTG GCCAGTGGCT GTGCGACATG GCCGCGCACG ATGAACGCCT GGTGGGCATC
ACGCCCGCGA TGCGCGAAGG CTCGGGCATG GTCGAATTCG AGCAGCGCTT TCCCGACCGG
TACTACGACG TGGGCATCGC CGAGCAGCAT GCCGTGACCT TTGCCGCCGG CATGGCCTGC
GAGGGCGCCA AGCCCGTGGT GGCGATCTAC TCGACCTTCC TGCAGCGCGG CTACGACCAA
CTGATCCACG ACGTGGCCCT GCAAAACCTG CCGGTGGTAT TTGCGCTCGA CCGCGCCGGC
CTGGTCGGGG CCGATGGCGC CACCCATGCC GGCGCCTACG ACATCGCGTT CCTGCGCTGC
ATTCCGAACA TGGGCCTGGC CTGCCCCGCC GACGAGCGCG AATGCCGCCA ACTGCTGAGC
AGCGCCTATG CCCAAAACCA CCCCGTGGCC GTGCGCTACC CGCGCGGCAG TGGTGCCGGA
GTGGCGCCAC TGGCCGGGCT GGACGGCCTG CCCTTTGGCA AAGGCGAAAT CCGCCGCGAA
CGCCAGCGCC AAGACAGCAA CGCACCGCGC ATTGCCATCC TGGCGTTCGG CAGCTTGCTG
TATCCGGCGC TGGAAGCGGC CGATGCGCTC GATGCCACCG TGGTCAACAT GCGCTGGGCC
AAGCCCCTCG ATGACGCCTT GCTGCGCCAA GTGGCCGAAG GCCACGATGC CCTGGTCACG
CTGGAAGAAG GCGCCATCAT GGGCGGCGCC GGCAGCGCAG TGACCGAAAC GCTCAACGCC
GCAGGCATCT TGCGCCCGGT GCTGCAACTG GGCCTGGCGG ACATCTTCAT CGAACATGGC
GACCCGGCCA AACTGCTGGC CATGCAGGGA CTGAACGCAG CCGGCATCCG CGCGGCAATT
GCTGCGCGCT TTCCGGCCAT CGACGTGGCC CGATGA
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| Protein sequence | MPSTSFPLLE TIDDPAQLRQ LARAQLKVLA AELRGFVLES VSRTGGHLSS NLGTVELTVA
LHHVFQTPHD RLVWDVGHQT YAHKILTGRR ERMHTLRQQG GISGFPQRGE SVYDTFGTAH
SSTSISAALG MALAAKRKGE SRHTVAIIGD GAMSAGMAFE ALNNAGVADC NLLVVLNDND
MSISPPVGAL NRYLAQLMSG RFYAAAKNMG KTVLRPMPPL LEFAKRFEQQ AKGLVVPATL
FEKFGFNYIG PIDGHDLDSL IPTLDNIKGL QGPQFLHVVT KKGQGYKLAE ADPVAYHGPA
RFDPAVGLVK SSTAPRLTFT QVFGQWLCDM AAHDERLVGI TPAMREGSGM VEFEQRFPDR
YYDVGIAEQH AVTFAAGMAC EGAKPVVAIY STFLQRGYDQ LIHDVALQNL PVVFALDRAG
LVGADGATHA GAYDIAFLRC IPNMGLACPA DERECRQLLS SAYAQNHPVA VRYPRGSGAG
VAPLAGLDGL PFGKGEIRRE RQRQDSNAPR IAILAFGSLL YPALEAADAL DATVVNMRWA
KPLDDALLRQ VAEGHDALVT LEEGAIMGGA GSAVTETLNA AGILRPVLQL GLADIFIEHG
DPAKLLAMQG LNAAGIRAAI AARFPAIDVA R
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