Gene Veis_3275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3275 
Symbol 
ID4691725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3652373 
End bp3653491 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content66% 
IMG OID639851038 
ProductROK family protein 
Protein accessionYP_998023 
Protein GI121610216 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.545553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGCGAC GGCTGGCCTA TTCCAAGAGC AAGGCGAACG CGATGGTGGC GGCCTTGCTG 
GATGAAGGGG TGTTGGACGA AGTGGGCTTG CAGGAATCTT CCGGCGGGCG CCGTGCCGAG
ACCTTGCGCT TGAGCGAGTC GCTGGGGGCG GTGCTGGGCG TGGACATGGA TGCCACCAGC
ATGCAACTGG CGCTGATGCG CCCGGACATG GCGGTGCTGG CGCGCCAGTG CGAGACCATC
GACGTGCGCC GCGGCCCCGG CGTGATTCTG GCGCAGCTAT GCGGCCTGAT GCGGGAACTG
ATGGCGCGCT GCGGCCTGTC CTCCTCGCAA TTGATTGCCA TCGGCATGGG TGTGCCCGGC
CCGGTGGACT TTGCCAGCGG CCAACTGGTC AACCCGCCGC TGATGCCGGA CTGGGACGGC
TTTTCCATCC GTGACTATCT GCGCGAGGCG TTCGTGGCGC CGGTGTTTGT CGATAACGAT
GTGAACCTGA TGGCGCTTGG CAAGCTCTGG CGCTTGCAGC GCACGCTGTC TGATTTTCTG
GTCATCAAGG TGGGCACCGG CATTGGCTGC GGCATTGTGT GCCACGGGCA GGTGTACCGC
GGCACCAATG GCTCGGCGGG CGATGTGGGG CATATCTGTG TGGACCAGGC CGGCCCGCGC
TGTCACTGCG GCAACCAGGG CTGTGTGGAG GCGATGGCGG CGGCCCCGGC GCTGGTGCGC
GCCGCCATCG AGGTGGCGCA AAAGGGCGAG AGCAGTTGGC TGGCCGAGCG CTTGCAGGCC
AGCGGCAGCC TGGGCATCGA GGACCTGGCG CAGGCCAGCC GCGTGGGGGA TGTGGCGGCG
AACATCCTCA TCCAGCGCGC AGGCAGTCTG GTCGGGCAGA TGCTGGCTTC GGTGGTGAAT
TTTTTCAATC CCTCGCATGT ATTCATTGGC GGACTGGTGG CCGACATGGG GCCGCTGTTT
CTGGCATCGG TGCGCCAGAG CGTGTACCAC CGCTCGCTGG CGCTTTCCAC CCGGCACCTG
GAAATACAGT GCGCGCCGCT GGCCGATGAT GCCGCTCTGG TGGGGGCCGG CGTGCTGGCG
ATGCAGGAAA GTCTGACGCA ATCAGGAGGT GCGCCATGA
 
Protein sequence
MARRLAYSKS KANAMVAALL DEGVLDEVGL QESSGGRRAE TLRLSESLGA VLGVDMDATS 
MQLALMRPDM AVLARQCETI DVRRGPGVIL AQLCGLMREL MARCGLSSSQ LIAIGMGVPG
PVDFASGQLV NPPLMPDWDG FSIRDYLREA FVAPVFVDND VNLMALGKLW RLQRTLSDFL
VIKVGTGIGC GIVCHGQVYR GTNGSAGDVG HICVDQAGPR CHCGNQGCVE AMAAAPALVR
AAIEVAQKGE SSWLAERLQA SGSLGIEDLA QASRVGDVAA NILIQRAGSL VGQMLASVVN
FFNPSHVFIG GLVADMGPLF LASVRQSVYH RSLALSTRHL EIQCAPLADD AALVGAGVLA
MQESLTQSGG AP