| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3269 |
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| Symbol | |
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| ID | 4694865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 3646060 |
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| End bp | 3647052 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639851032 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_998017 |
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| Protein GI | 121610210 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.605596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.629082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGA AATTTCACCC CGATCGGGCA TGGACCCGCC GCCGCGCATT GTCGGCGCTG
GCCGGCCCTG TGCTGGCGTT GGCGTTGGCC AGCCCGGCGC CGGCGCAGAA CAAACTCACG
CTGGGTGTGT CCATCCCGTC GGCCACGCAT AGCTTTCAAG GTGCCATCGT GTTCTGGGCG
AACAAGGCCA AGAAGGATCT GGAGCAGGCC CACCCCGGCC TGCAGGTCGT CATCAAGACG
GCAAGCGGTG GGCCCGAGCA GGCCAACCAG TTGCAAGACA TGCTGACGGC GAACAAGATC
GGCGCGCTGG TCATTTTTCC GTTCGAATCG GCGGCGCTGA CCAAGCCGGT GGCGCAGGTC
AAGGCCAAGG GCGTGTACGT GCTGGTGGTC GATCGCGGCC TGACCGACCC CAGTGCGCAG
GACGCCTATC TGTCGTATGA CAACACCGCC TTTGGCAAGA TTCCCGCCGA GTTCATGGCC
AAGACCCTGG GCGGCAAGGG GCAGGTGGTT GCCTTGCGCG GCATTGCCAC CACGCTGGAC
AACGAGCGCA TGGACGGCTT CAACGCCGTG CTCAAAAACA ACCCCGAGAT CAAGCTGCTC
GATGCCAAAT ACGCCAACTG GAACCGCGAC GACGCCTTCA AGGTGATGCA GGATTACCTG
ACGCGCTTTG CGCATATCGA TGCCGTGTGG GCCGCCGACG ATGACATGGC CGTGGGCGTG
CTCAAGGCCA TCGAGCAGGC CAAGCGCAAG GACATCAAAC TGGTGTTCGG CGGTGGTGGT
TCCAAGGGCA TGATCAAGGC GCTGATGGAC GGCAGCAACC CGGTGATACA GGCCAATGTG
TCGTTCTCGC CGAAGTTCAT CTACGAAGCG ATCAAGCTCA CCGCCGAGGC GCGCCTCAAG
GGCGACAAGC TGCCAGCAAG GACCATCCTC CCGGTGGTGC AGATCACCAA AGAGAATGCC
AAGGACTTTT ACTTTCCGGA CTCGCCGTAC TGA
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| Protein sequence | MKQKFHPDRA WTRRRALSAL AGPVLALALA SPAPAQNKLT LGVSIPSATH SFQGAIVFWA
NKAKKDLEQA HPGLQVVIKT ASGGPEQANQ LQDMLTANKI GALVIFPFES AALTKPVAQV
KAKGVYVLVV DRGLTDPSAQ DAYLSYDNTA FGKIPAEFMA KTLGGKGQVV ALRGIATTLD
NERMDGFNAV LKNNPEIKLL DAKYANWNRD DAFKVMQDYL TRFAHIDAVW AADDDMAVGV
LKAIEQAKRK DIKLVFGGGG SKGMIKALMD GSNPVIQANV SFSPKFIYEA IKLTAEARLK
GDKLPARTIL PVVQITKENA KDFYFPDSPY
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