Gene Veis_3260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3260 
Symbol 
ID4693962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3637157 
End bp3638299 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content63% 
IMG OID639851023 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_998008 
Protein GI121610201 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.728931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA ATCTTCAACT CAAAGACCCT CAGTGGGCGG ACTTGGCCCT TGTCACCGTG 
AAGGAACTGG TCGCCGAGTG CCGCGAGGAG CTCGACGAGT GCGAACGCAT CGGCCGCTTC
CCCGCCGAAA CCTACCGGCG CATGGGAGCT CGCGGGCTGC TCGGCGTGAT CACACCCGCG
CAATGGGGTG GACAGGGAGG TGACGCCCCG GAGTACTGCT TCACCACCGA GGCCATGTGC
CGCTACGGCT TGGTATCGAG CCAGGTGCAG ATCCAGGGCA TGCGCTGGAT GAACGACTGG
GGTACGCCAA CGCAAAAGAA GAAGTACTTG CCCGGCATGG TGGAAGGCTC GCTGGTGTTC
TCGGAATCCA TTTCAGAGCC GGGCGCAGGC TCTTCGCTGA AGAAACTCTC CACCACCGCC
GTGCGAAAGG GCGGTGACTG GATCATCAAC GGCAAAAAGA TCCACATCAA CCTCGGCGCA
GAGAGCCACG TCACACTGGT CTATGCAATG ACCGACGCGG GGCTCACCTC CTTCCTCGTG
GACACGGACC TGCCTGGCCT CACGCGCCGC CACAGCGAAC CGCTGGGTTA CCGCTTCCTG
CCGACCGCCG ACATGATCTT CGAAGATGTC CGCGTGCCCG ATGCGGCGCT GCTGGGAGCA
CCCGGCGAAG GCATGAAGAC CTTCCTGTCC ACGTTCAACG TCAGCCGCCT GGGCAATGCA
TCGGAGCTGA TCGGCTTTGC CACCCGCGCG CTGGCCGAAG CCACCGACTA CGCCAAGCAA
CGTGACGTGG GGCACCACAA GGTCACCGAC TTCCAGGGTA TCCAGTGGAC CCTGGCCGAC
TGCTACAGCG CGCTGTATGG GGCCTCGCTG GCCCGCGACC ACGCAGCCAA CCTCGTCAAA
CAGGGCCAGG AGTTCTCCAT GGCCACCAGC CTGGCGAAGA AGCTGGCCGT CGAGGCTGCC
GAGAAAACCA CCAACGACTG CTTCGCGCTG ACGGGTGGCT ACGGCCTGTA CCGCGACAAG
CCCTGGGGCC AATTGCTGTA CGAAGTGAAG ACGCTGCGGA TCGCCGGCGG ATCGGTGGAA
ATCCTGCGCA ACTACATCGC GCACCAGATC CTCAAGGACG AAAAACTCAG GGGACTCAAG
TGA
 
Protein sequence
MNINLQLKDP QWADLALVTV KELVAECREE LDECERIGRF PAETYRRMGA RGLLGVITPA 
QWGGQGGDAP EYCFTTEAMC RYGLVSSQVQ IQGMRWMNDW GTPTQKKKYL PGMVEGSLVF
SESISEPGAG SSLKKLSTTA VRKGGDWIIN GKKIHINLGA ESHVTLVYAM TDAGLTSFLV
DTDLPGLTRR HSEPLGYRFL PTADMIFEDV RVPDAALLGA PGEGMKTFLS TFNVSRLGNA
SELIGFATRA LAEATDYAKQ RDVGHHKVTD FQGIQWTLAD CYSALYGASL ARDHAANLVK
QGQEFSMATS LAKKLAVEAA EKTTNDCFAL TGGYGLYRDK PWGQLLYEVK TLRIAGGSVE
ILRNYIAHQI LKDEKLRGLK