| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3238 |
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| Symbol | rnc |
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| ID | 4690873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 3614432 |
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| End bp | 3615175 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639851001 |
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| Product | ribonuclease III |
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| Protein accession | YP_997986 |
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| Protein GI | 121610179 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.257375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0702268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCGGCCCG ACCTGATTGC GCTGCAAGAG CGCTTGCAGC ATGTTTTTTC CGACCCCGGT
CTGCTCGAGC GCGCCACTAC GCACCGCAGT TTTTCTGCCG AGCACAACGA GCGGCTGGAG
TTCTTGGGCG ACTCCGTGCT GAATCTGGCC GTCTCCAGCC TGCTCTACCA GCGCTTGTCG
GCCCTGCCCG AAGGGGAACT CTCGCGTGTC CGCGCCAACC TCGTCAGACA GGAGAGCCTG
TACCAGTTGG CCTTGCGCTT GCCACTGGCC CAGGCGCTGC GTCTGGGCGA GAGCCTCTCG
GGCAACCGGC AACGCCGTTC ACGGCGCCGG TGCGCTGATG AACTGCAACC GGACGAGGCC
GGATCCGGCG GCCTGCAACA CCCATCGATC CTGGCCGATG CGCTGGAAGC GCTGATCGGC
GCCGTGTACC TGGATGCCGG TTACGCCAGC GCCCAAGCGC TGGTGCAGCG CCTGTTCCAG
GATGTGGAGA TCAGCCCCCG GATGCAGGCG GCGGCCAGGG ACGCCAAAAC CGCATTGCAG
GAGTGGCTCG CGAGCCGCAA AATGAAACCG CCCCAGTACC AGGTGGTGGC AAGGGTCGGG
GCGGCGCATT GTCCGACCTT CGAAGTCGCG TGCGGTATTC CCGCTCTGGG CCTGACCGAG
CGCGGCAGCG CCGGCTCGCG CCAGGCCGGC GAGCAGGCGG CGGCGGCGGC CATGCTGGCC
ACATTGAAAG CCAGAAATTT ATGA
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| Protein sequence | MRPDLIALQE RLQHVFSDPG LLERATTHRS FSAEHNERLE FLGDSVLNLA VSSLLYQRLS
ALPEGELSRV RANLVRQESL YQLALRLPLA QALRLGESLS GNRQRRSRRR CADELQPDEA
GSGGLQHPSI LADALEALIG AVYLDAGYAS AQALVQRLFQ DVEISPRMQA AARDAKTALQ
EWLASRKMKP PQYQVVARVG AAHCPTFEVA CGIPALGLTE RGSAGSRQAG EQAAAAAMLA
TLKARNL
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