Gene Veis_3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3233 
Symbol 
ID4693942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3609205 
End bp3609759 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content61% 
IMG OID639850996 
Productelongation factor P 
Protein accessionYP_997981 
Protein GI121610174 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.475124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.149098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG CTCAAGAAAT CCGCGCCGGC AACGTCATCA TGCACGGCAA GGATCCGATG 
GTCGTCCTGA AGACCGAATA CGCCCGTGGC GGCCGCGGCG CTGCCACCGT GCGCATGAAG
CTCAAGAGCC TGATCGCCAA CTTTGGCACC GAAATCGTGC TCCGGGCCGA CGACAAGATC
GACAACGTGA TCCTGGACAA GAAGGAATGC ACCTATTCCT ACTTTGCCGA CCCGATGTAT
GTCTGCATGG ACGCCGAATA CAACCAGTAC GAAGTCGAAG CCGGGAACAT GGGCGACGCA
CTGAACTACC TGGAAGACGG CATGGCCCTC GAAGTGGTGT TCTACGACGG CAAGGCGATC
TCGGTCGAAC TGCCCACCAG CGTGGAACGC GAGATCACCT GGACCGAACC GGCCGTCAAG
GGCGACACCT CCGGCAAGGT GATGAAGCCG GCCAAGATCG CCACCGGCTT CGAGGTGCCG
GTGCCGCTGT TCGTGGCGCA AGGCGACAGG ATAGAAATCG ACACCCGCAC CGGCGAATAC
CGCAGGCGCG TGTGA
 
Protein sequence
MKIAQEIRAG NVIMHGKDPM VVLKTEYARG GRGAATVRMK LKSLIANFGT EIVLRADDKI 
DNVILDKKEC TYSYFADPMY VCMDAEYNQY EVEAGNMGDA LNYLEDGMAL EVVFYDGKAI
SVELPTSVER EITWTEPAVK GDTSGKVMKP AKIATGFEVP VPLFVAQGDR IEIDTRTGEY
RRRV