| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3232 |
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| Symbol | rimO |
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| ID | 4694846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 3607813 |
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| End bp | 3609201 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639850995 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_997980 |
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| Protein GI | 121610173 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.653415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.176593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAA TGACCGCAGA GCGCGCCCCG CGCATAGGCA TGGTGTCGCT CGGCTGCCCC
AAGGCCCTGA CCGACTCCGA ACTCATCCTG ACGCAGTTGA GCGCCGAGGG CTACGAGACC
TCCAAGACCT TTCAGGGCGC GGATTTGGTC ATCGTCAACA CCTGCGGCTT CATCGACGAT
GCGGTCAAGG AAAGCCTGGA CACCATTGGC GAGGCGCTGG CCGAGAACGG CAAGGTCATC
GTCACCGGCT GCCTGGGCGC GCGCACCGGC GCCGACGGCG GCAACATGGT GCGCCAGTTG
CACCCCAGCG TACTGGCCGT GACCGGGCCC CAGGCCACGC AGCAGGTGCT GGACGCAGTC
CACCGGAACC TGCCCAAGCC GCACGACCCC TTCATCGATC TGGTGCCCGG GGGCATGGGC
ATTGCGGGCC TGAAGCTCAC GCCCAGGCAT TACGCCTACC TGAAGATCAG CGAGGGCTGC
AACCACCGCT GCACGTTCTG CATCATCCCG ACCCTGCGCG GCGCGCTGGT CTCGCGCCCG
ATTGGCGCTG TGCTGAACGA GGCCAGGGCC TTGTTTGCCG GCGGCGTGAA AGAACTGCTG
GTGATCAGCC AGGACAGCTC GGCCTATGGC GTGGACATGC AGTACCGCAC CGGTTTCTGG
GACGGCCAAC CGCTCAAGAC CCGCCTGCTG GAACTGGTGC AGGCGCTGGG CGCGCTCGCC
GAGCCCTACG GCGCCTGGGT GCGGCTGCAC TATGTGTACC CCTACCCGAG CGTCGATGCG
CTCATCCCGC TGATGGCCCA GGGCCGGGTG CTGCCCTATC TGGATGTGCC CTTGCAGCAC
AGCCACCCCG AGGTGCTGCG GCGCATGAAG CGCCCCGCCA GCGGCGAGCG CAACCTGGAG
CGCATACAGC GCTGGCGCGA AGTCTGCCCC GAGATCGTGA TCCGCAGCAG CTTCATCGTC
GGCTTTCCCG GCGAGACGCA GGCCGAGTTC GAGCATCTAC TGGACTTCCT GCGCGCAGCC
CGAATCGACC GCGTCGGCTG CTTTGCCTAC AGCGACGTGA GCGGCGCCGT GGCCAACGAT
CTGCCCGGCA TGTTGCCGAT GCCACTGCGG CAAGAGCGCC GCGCCCGTTT CATGGCCGTG
GCCGAAGCGC TGTCGAGCGC CAAACTGCAA CGCCGCGTGG GCGCCACGAT GCAGGTGCTG
ATCGACGCTG CCCCGGGCCT GGGCCGCAAG GGCGGCGTAG GCCGCAGCTA TGCCGACGCG
CCGGAGATCG ACGGCGCAGT GCACCTGCTG CCGCCCGAAA AGATCAGCAA GACCCTGAAG
GTGGGCGAGT TCACCCAGGC CCGCATCGTC GGCGTGCGCG GGCATGACCT GCTGGCGCAG
CCGATTTGA
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| Protein sequence | MTTMTAERAP RIGMVSLGCP KALTDSELIL TQLSAEGYET SKTFQGADLV IVNTCGFIDD
AVKESLDTIG EALAENGKVI VTGCLGARTG ADGGNMVRQL HPSVLAVTGP QATQQVLDAV
HRNLPKPHDP FIDLVPGGMG IAGLKLTPRH YAYLKISEGC NHRCTFCIIP TLRGALVSRP
IGAVLNEARA LFAGGVKELL VISQDSSAYG VDMQYRTGFW DGQPLKTRLL ELVQALGALA
EPYGAWVRLH YVYPYPSVDA LIPLMAQGRV LPYLDVPLQH SHPEVLRRMK RPASGERNLE
RIQRWREVCP EIVIRSSFIV GFPGETQAEF EHLLDFLRAA RIDRVGCFAY SDVSGAVAND
LPGMLPMPLR QERRARFMAV AEALSSAKLQ RRVGATMQVL IDAAPGLGRK GGVGRSYADA
PEIDGAVHLL PPEKISKTLK VGEFTQARIV GVRGHDLLAQ PI
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