| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3230 |
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| Symbol | |
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| ID | 4690365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 3604401 |
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| End bp | 3606956 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639850993 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_997978 |
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| Protein GI | 121610171 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.105029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCG AACTGTCGAC CGACCCTCTT TCCCCTGCCG GAGAGGGGGC CATGGATTCC
ATTGCGCAAG CGCGTCTGCA AGCCCTGGTG GATGCGGTGC CGGTGGCCTT GATGGAGTTT
CGCTTGCAGG GCGAGCGGCT GCGCTTGCGC GGGGCCAATG CCGCAGCCCG CCGCATGCCC
GGCCTGGGCG CAGTGCGCAG CCCGGGCGCG GATGCCAGCG AGGTGTTCGA CCAGTTGGCA
GACACCCCCT TGATGGACCA GTTGTATGGC GTGGTGCGCG TGGGCGCATT GCTCGAATGC
CGCCAGGTGG TGCGCGAGCC TGGCCGGCTG CTGCTGGCCT GGGACCTGAC GGCCCGCCGC
GTCGCCCGTG ACGGCATCAT GGTCACGGTG CGCGATGCCT CCGAAGCCGA AACCCTGCGC
ACCGCGCTGG CGGCGTCCGA GCGCTCGCTG GAGGAGGTGC GGCGCGATCT GCGGGAGCAG
ACCGAGGTCT TCGACACCAT GGAAAGCCTG GCGCGCGCAG GCCACTGGCG CCGCATCGAA
GACCCGGGCG AGACCGTGCT GCTGTGGTCC CCCGGTTTGT GCGCGATCGC CGGGTTCGAG
CAGCAGGAAT GGGTCGACCC CGAGCGTGCC GTCAGCGGCA TCCTGCCCGA AGACCGCCAT
GTGTTTCGCC AACTGCGCGA GCGCGATGGA CGCGGCGAAC GCGGCCTGGA CGCGGAATAC
CGCTGGCGCC GCCCCGACGG CCAAGTGCGC TGGATGCGCA CGCGTTTGCA GCGCACGCTG
CCGCGCGACG GGGTGCGGGT GGTGATGGGC GTGGTGCAGG ACGTGACCGA CGAGCACCGG
GCCGCAGAGC AGTTGCGCGA GCAACTGCTG TTCATCCAGC GCATTGCCAG CCGCATACCC
GGTTTCATCT ACGAGTTTCG GCTGCATTCC GACGGCGCGA CCAGCGTGCA GTACATCAGC
GATGCGGTGC GCGAATTCAT GGGGGTCGAA CCCCGGGAGG TCACGGCCGA CCACGGCGTG
CTGATGCTGC GCGTGCTGGC CCAAGACCGG CCGCAGGTGC GGCGCTCGGC GATCACCTCG
GTGCGCAAGC TGGTTCCCTG GCAATGCGAG TACCGCGTGT GCATGTCCGA CGGCAGTGTG
CGCTGGCACA TGACCAATGC CATCCCGCAC CGCGAGCCTG ACGGCTCGGT GGTCTCGCAT
GGCTTCACGA TGGACATCAC CGACCGCAAA CTGGCCGAGC AGGAGATCGA GCGCCTGGCG
TTCTACGACG CGCTGACCGG CCTGCCCAAC CGGCGCCTGC TGCTCGACCG GCTGCAACGC
AGCATCGCCA CCTGCCAGCG CACGCACAAA CTGGGCGCGC TGCTGTTCAT CGACCTGGAC
AACTTCAAAG ACCTCAACGA CACCCTGGGC CACGACATGG GCGACCAACT GCTGGCGCAG
GTCGCCACCC GCCTGGTGGC CAGCGTGCGC GCCGCCGACA CCGTGGCCCG CTTCGGCGGC
GACGAATTCG TCGTCATGCT CGAAGCCCTG GCACCCGACC TGCGCAGCGC CACCGCGCAG
GCCGAAATGG TGGCCGACAA ACTGCTGGCC AGCCTGAACC AGCCCTTCGC GCTCGACGGC
GGCCAGCACT ACAGCACGCT GAGCATCGGC GTGACGCTGT TTGGCGAGCA GCGCCTGTCG
GTCGACGAAC TGCTCAAGCG CGCCGACCTG GCGCTGTACC AGGCCAAGGC CGCAGGCCGC
AACACCCAGC GCTTCTTCGA CCCGGACATG CAGGCCGCCG TCAACGCCCG CTCCAACCTG
GAGGCCGACC TGCGCCAGGG CCTGGCGCGC GCCGAACTGC TGGTGTACTA CCAGCCGGTG
GTCGACCACC AGGCGCGCCT GATGGGCGCC GAAGCCCTGG TGCGCTGGCG CCACCCGCAG
CGCGGCATGA TCGGCCCGGC AGACTTCATC CCGCTGGCCG AGCAGACCGG GCTGATCCTG
CCGCTGGGCC AGTATGTGCT GCAAACCGCC TGCGCGCAGT TGCAGCGCTG GAGCCGGCAC
CCGGACACCG CCGGGCTGTC GATCTCGGTG AACGTCAGCG CCCGGCAATT TCGGCAACCG
GGCTTTGTCG CGCAGGTGCT GCACCAGCTC AAAAGCCACG GCGCCGACCC GCGCAGACTC
AAGCTGGAGC TGACCGAAAG CCTGCTGCTG GGCGACATCG AAGACACCAT CGCCCGCATG
GCGCAGCTCA AGAGCGAAGG CGTGGGCTTT GCGCTGGACG ACTTCGGCAC CGGCTACTCC
AGCCTGAGTT ACCTCAAGCG CCTGCCGCTG GACCAGATCA AGATCGACCA GAGCTTCGTG
CGCGAGGTGC TGGCCGACCC GAACGACGCG GCCATCGTGC GCACCATCCT GGCGCTGGCC
AAGAGCCTGG ACCTGCAAGT GGTGGCCGAA GGGGTCGAGA CCACCGGACA GTTGTCGTTC
CTGCAACTGC ATGGCTGCGA AGGGTTTCAG GGCTATCTGT TCGGCCGGCC CGGGCCGGTG
GCGGATATCG ATGCCTTCCT GCACCCTGCC GGCTGA
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| Protein sequence | MTTELSTDPL SPAGEGAMDS IAQARLQALV DAVPVALMEF RLQGERLRLR GANAAARRMP
GLGAVRSPGA DASEVFDQLA DTPLMDQLYG VVRVGALLEC RQVVREPGRL LLAWDLTARR
VARDGIMVTV RDASEAETLR TALAASERSL EEVRRDLREQ TEVFDTMESL ARAGHWRRIE
DPGETVLLWS PGLCAIAGFE QQEWVDPERA VSGILPEDRH VFRQLRERDG RGERGLDAEY
RWRRPDGQVR WMRTRLQRTL PRDGVRVVMG VVQDVTDEHR AAEQLREQLL FIQRIASRIP
GFIYEFRLHS DGATSVQYIS DAVREFMGVE PREVTADHGV LMLRVLAQDR PQVRRSAITS
VRKLVPWQCE YRVCMSDGSV RWHMTNAIPH REPDGSVVSH GFTMDITDRK LAEQEIERLA
FYDALTGLPN RRLLLDRLQR SIATCQRTHK LGALLFIDLD NFKDLNDTLG HDMGDQLLAQ
VATRLVASVR AADTVARFGG DEFVVMLEAL APDLRSATAQ AEMVADKLLA SLNQPFALDG
GQHYSTLSIG VTLFGEQRLS VDELLKRADL ALYQAKAAGR NTQRFFDPDM QAAVNARSNL
EADLRQGLAR AELLVYYQPV VDHQARLMGA EALVRWRHPQ RGMIGPADFI PLAEQTGLIL
PLGQYVLQTA CAQLQRWSRH PDTAGLSISV NVSARQFRQP GFVAQVLHQL KSHGADPRRL
KLELTESLLL GDIEDTIARM AQLKSEGVGF ALDDFGTGYS SLSYLKRLPL DQIKIDQSFV
REVLADPNDA AIVRTILALA KSLDLQVVAE GVETTGQLSF LQLHGCEGFQ GYLFGRPGPV
ADIDAFLHPA G
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