| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3228 |
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| Symbol | |
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| ID | 4693091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 3603054 |
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| End bp | 3604004 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639850991 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_997976 |
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| Protein GI | 121610169 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.285749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAGC GCTTTGCCCT TTCCGGTTTC CTCGGCTTGG TCATGCTGTG CGCGCCGCTG
GCGCAAGCGG CTGCAGCGGA GCCCGCCAGT TGCAAGACCG TGCGTTTTGC CGATGTGGGC
TGGAGCGATA TCGCGGCCAC GACCGGGCTG GCCTCGGTGG TGCTCGAAGG GCTGGGCTAC
CAGCCGAGCG TGACGATCGC CTCGTTGCCG ATCGCGTTCA CCGGCATCAA GTCCAAGCAG
ATCGACGCCT TCCTGGGCTA CTGGTTTCCC AGCATGACGC CCATCATCGA GCCTTTCGTC
AAGGCCGGGC AGATCAAGGT GCTCGACCGG CCCAACCTGG TCGGCGCCAA GTACACACTG
GCGGTTCCGG CCTATCTGTA CGACAAGGGG CTCAAGACCT TCACCGACAT CGCCAAGTTC
CACAAAGAGT TGGACGGCAA GCTCTACGGC ATCGAGCCTG GCAACGACGG CAACGCGCTG
ATGCAGGGCA TGATCGACAA AAACGAATAT GGCCTGAAGG GCTTCAAACT GGTGGAGTCC
AGCGAAGCCG GCATGCTGGC CGAAGTCCAG CGCGCAGCGC GCAGCGGCAA GGCCATCGTC
TTTCTGGGCT GGGAGCCGCA TCCGATGAAT GTGCAGATGA AGATGAAATA CCTGCAAGGC
GGCGATGCCG TGTTTGGCCC CAACCTGGGC GAGGCCAAGG TCTTCACGGC GCTGCCGCCC
GACTACGAGG CACGCTGCCC GAATGTCGCG CGCTTGCTGA AGAATCTGCG CTTTACCACC
GACATCGAAA ATGCGGTGAT GCTGGACATC CTCGAAAAGG TCAAGCCCAG TGATGCCGCC
CGGGCCTATC TGAAGAAAAA CCCCGCCCCG CTGGGCGAAT GGCTCGATGG CGTCAAGACC
TTCTCCGGCC AGGAAGGTCT GCCCGCCGTC ACGGCGGCGC TGAAAAACTG A
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| Protein sequence | MTKRFALSGF LGLVMLCAPL AQAAAAEPAS CKTVRFADVG WSDIAATTGL ASVVLEGLGY
QPSVTIASLP IAFTGIKSKQ IDAFLGYWFP SMTPIIEPFV KAGQIKVLDR PNLVGAKYTL
AVPAYLYDKG LKTFTDIAKF HKELDGKLYG IEPGNDGNAL MQGMIDKNEY GLKGFKLVES
SEAGMLAEVQ RAARSGKAIV FLGWEPHPMN VQMKMKYLQG GDAVFGPNLG EAKVFTALPP
DYEARCPNVA RLLKNLRFTT DIENAVMLDI LEKVKPSDAA RAYLKKNPAP LGEWLDGVKT
FSGQEGLPAV TAALKN
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